Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05855

Experiment: KLEB31 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB31 MOI 1
1,228,862	+				+1.4
1,228,862	+				-0.5
1,228,862	+				-0.9
1,228,862	+				-0.4
1,228,862	+				-0.4
1,228,870	-				-1.6
1,228,870	-				-0.2
1,228,870	-				+0.2
1,228,870	-				-0.6
1,228,871	-				+0.1
1,228,877	+				-0.2
1,228,877	+				-2.6
1,228,877	+				-0.3
1,228,877	+				+0.4
1,228,877	+				+0.2
1,228,877	+				-0.9
1,228,877	+				-0.4
1,228,877	+				+1.9
1,228,877	+				-0.4
1,228,885	-				-2.3
1,228,885	-				+0.2
1,228,885	-				-0.6
1,228,885	-				+1.0
1,228,885	-				-0.7
1,228,885	-				+1.7
1,228,960	+				-0.7
1,228,986	+				-1.1
1,228,997	-		BWI76_RS05850	0.11	+1.2
1,229,018	+		BWI76_RS05850	0.14	+0.4
1,229,018	+		BWI76_RS05850	0.14	+0.5
1,229,018	+		BWI76_RS05850	0.14	-2.3
1,229,025	+		BWI76_RS05850	0.16	-1.0
1,229,026	-		BWI76_RS05850	0.16	-1.3
1,229,040	+		BWI76_RS05850	0.18	-1.6
1,229,040	+		BWI76_RS05850	0.18	-0.8
1,229,048	-		BWI76_RS05850	0.20	+0.7
1,229,048	-		BWI76_RS05850	0.20	-0.4
1,229,060	+		BWI76_RS05850	0.22	-0.7
1,229,060	+		BWI76_RS05850	0.22	-0.1
1,229,060	+		BWI76_RS05850	0.22	+0.6
1,229,065	+		BWI76_RS05850	0.23	+1.0
1,229,068	-		BWI76_RS05850	0.23	+0.8
1,229,068	-		BWI76_RS05850	0.23	+3.5
1,229,073	-		BWI76_RS05850	0.24	-0.4
1,229,073	-		BWI76_RS05850	0.24	+1.0
1,229,075	+		BWI76_RS05850	0.24	+1.9
1,229,083	-		BWI76_RS05850	0.26	-0.3
1,229,129	+		BWI76_RS05850	0.34	-0.8
1,229,178	-		BWI76_RS05850	0.43	-0.7
1,229,184	-		BWI76_RS05850	0.44	+0.5
1,229,198	-		BWI76_RS05850	0.46	-0.1
1,229,290	+		BWI76_RS05850	0.63	+1.2
1,229,293	-		BWI76_RS05850	0.63	-0.2
1,229,298	-		BWI76_RS05850	0.64	-0.9
1,229,328	-		BWI76_RS05850	0.69	+0.3
1,229,347	+		BWI76_RS05850	0.73	+2.0
1,229,370	-		BWI76_RS05850	0.77	+1.9
1,229,371	+		BWI76_RS05850	0.77	-2.1
1,229,387	-		BWI76_RS05850	0.80	-2.8
1,229,397	+		BWI76_RS05850	0.82	+0.2
1,229,397	+		BWI76_RS05850	0.82	+2.0
1,229,402	+		BWI76_RS05850	0.82	+1.7
1,229,407	+		BWI76_RS05850	0.83	-0.9
1,229,410	-		BWI76_RS05850	0.84	+0.4
1,229,425	+		BWI76_RS05850	0.87	+0.0
1,229,425	+		BWI76_RS05850	0.87	+0.4
1,229,433	-				+2.0
1,229,443	-		BWI76_RS05850	0.90	-1.6
1,229,478	+				-0.2
1,229,486	-				-1.0
1,229,487	+				-0.4
1,229,495	-				-2.6
1,229,495	-				+1.4
1,229,496	-				-0.9
1,229,507	-				+1.3
1,229,571	-				+1.3
1,229,604	+				+1.8
1,229,612	-				+0.8
1,229,636	-				+1.0
1,229,636	-				-0.3
1,229,636	-				+1.7
1,229,742	-				-2.3
1,229,742	-				+1.0
1,229,742	-				+1.4
1,229,742	-				-1.6
1,229,768	+				+0.8
1,229,768	+				+0.4
1,229,768	+				+0.5
1,229,771	-				-0.8
1,229,776	-				-0.3
1,229,786	-				+0.4
1,229,805	+				-1.0
1,229,813	-				+0.0
1,229,852	-				+1.1
1,229,859	+				+0.8
1,230,003	+		BWI76_RS05855	0.18	-0.3
1,230,026	-		BWI76_RS05855	0.21	-0.2
1,230,060	+		BWI76_RS05855	0.24	+0.0
1,230,159	-		BWI76_RS05855	0.35	-1.4
1,230,247	-		BWI76_RS05855	0.44	-0.6
1,230,253	+		BWI76_RS05855	0.45	+0.6
1,230,261	-		BWI76_RS05855	0.46	-1.7
1,230,393	+		BWI76_RS05855	0.59	-0.4
1,230,397	-		BWI76_RS05855	0.60	-0.1
1,230,476	+		BWI76_RS05855	0.68	-0.1
1,230,530	+		BWI76_RS05855	0.74	-2.1
1,230,535	+		BWI76_RS05855	0.74	+2.8
1,230,586	-		BWI76_RS05855	0.80	-0.6
1,230,911	+		BWI76_RS05860	0.13	-0.2
1,231,329	+		BWI76_RS05860	0.52	+0.6
1,231,517	+		BWI76_RS05860	0.70	+0.1
1,231,632	+		BWI76_RS05860	0.81	+0.1