Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05685

Experiment: KLEB31 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB31 MOI 1
1,194,323	-		BWI76_RS05680	0.28	+0.9
1,194,407	+		BWI76_RS05680	0.36	+0.5
1,194,473	+		BWI76_RS05680	0.43	+0.8
1,194,530	-		BWI76_RS05680	0.48	+2.0
1,194,621	-		BWI76_RS05680	0.57	-0.1
1,195,023	+				+2.1
1,195,441	+		BWI76_RS05685	0.14	-2.8
1,195,681	+		BWI76_RS05685	0.39	-0.0
1,195,691	+		BWI76_RS05685	0.40	+1.9
1,195,740	+		BWI76_RS05685	0.46	+0.5
1,195,887	-		BWI76_RS05685	0.62	+0.2
1,195,920	+		BWI76_RS05685	0.65	+1.4
1,195,926	-		BWI76_RS05685	0.66	-2.0
1,195,939	-		BWI76_RS05685	0.67	+2.1
1,195,945	-		BWI76_RS05685	0.68	+0.7
1,196,021	+		BWI76_RS05685	0.76	-0.4
1,196,030	-		BWI76_RS05685	0.77	-1.0
1,196,133	+		BWI76_RS05685	0.88	+1.6
1,196,146	-		BWI76_RS05685	0.89	+0.3
1,196,219	+				-0.8
1,196,232	-				+1.6
1,196,239	+				-1.6
1,196,243	+				+0.7
1,196,293	-				-1.4
1,196,363	+				+0.7
1,196,364	-				-0.4
1,196,368	+				+1.6
1,196,371	-				-0.5
1,196,374	+				+1.4
1,196,394	+				-2.6
1,196,466	-				-0.5
1,196,509	+		BWI76_RS05690	0.14	-0.2
1,196,509	+		BWI76_RS05690	0.14	-1.0
1,196,510	+		BWI76_RS05690	0.14	-1.6
1,196,517	-		BWI76_RS05690	0.15	+0.3
1,196,517	-		BWI76_RS05690	0.15	-0.3
1,196,517	-		BWI76_RS05690	0.15	+0.4
1,196,517	-		BWI76_RS05690	0.15	+0.9
1,196,519	+		BWI76_RS05690	0.15	-2.0
1,196,527	+		BWI76_RS05690	0.16	-1.4
1,196,527	-		BWI76_RS05690	0.16	-1.8
1,196,527	-		BWI76_RS05690	0.16	+2.2
1,196,531	+		BWI76_RS05690	0.17	-1.6
1,196,662	-		BWI76_RS05690	0.32	+1.4
1,196,723	+		BWI76_RS05690	0.39	-0.8
1,196,760	+		BWI76_RS05690	0.44	-0.2
1,196,800	-		BWI76_RS05690	0.49	+0.2
1,196,808	-		BWI76_RS05690	0.49	-1.1
1,196,826	+		BWI76_RS05690	0.52	-0.7
1,197,016	-		BWI76_RS05690	0.74	+0.2
1,197,077	+		BWI76_RS05690	0.81	-0.7
1,197,205	-				+0.8