Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS04450 and BWI76_RS04455 are separated by 19 nucleotides BWI76_RS04455 and BWI76_RS04460 are separated by 247 nucleotides
BWI76_RS04450: BWI76_RS04450 - citrate lyase subunit alpha, at 918,565 to 920,091
_RS04450
BWI76_RS04455: BWI76_RS04455 - triphosphoribosyl-dephospho-CoA synthase CitG, at 920,111 to 921,019
_RS04455
BWI76_RS04460: BWI76_RS04460 - 4-hydroxy-tetrahydrodipicolinate reductase, at 921,267 to 922,088
_RS04460
Position (kb) 920
921
922 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 919.454 kb on + strand, within BWI76_RS04450 at 919.509 kb on + strand, within BWI76_RS04450 at 919.529 kb on - strand, within BWI76_RS04450 at 919.639 kb on + strand, within BWI76_RS04450 at 920.000 kb on - strand at 920.081 kb on - strand at 920.159 kb on - strand at 920.251 kb on + strand, within BWI76_RS04455 at 920.281 kb on - strand, within BWI76_RS04455 at 920.283 kb on + strand, within BWI76_RS04455 at 920.350 kb on + strand, within BWI76_RS04455 at 920.372 kb on - strand, within BWI76_RS04455 at 920.479 kb on - strand, within BWI76_RS04455 at 920.497 kb on - strand, within BWI76_RS04455 at 920.689 kb on + strand, within BWI76_RS04455 at 920.728 kb on + strand, within BWI76_RS04455 at 920.873 kb on + strand, within BWI76_RS04455 at 920.952 kb on + strand at 921.142 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB31 MOI 1 remove 919,454 + BWI76_RS04450 0.58 +0.2 919,509 + BWI76_RS04450 0.62 +0.5 919,529 - BWI76_RS04450 0.63 +0.2 919,639 + BWI76_RS04450 0.70 +0.0 920,000 - -1.7 920,081 - +0.1 920,159 - -1.1 920,251 + BWI76_RS04455 0.15 +0.0 920,281 - BWI76_RS04455 0.19 -1.6 920,283 + BWI76_RS04455 0.19 -0.6 920,350 + BWI76_RS04455 0.26 -0.3 920,372 - BWI76_RS04455 0.29 -0.6 920,479 - BWI76_RS04455 0.40 -1.1 920,497 - BWI76_RS04455 0.42 +1.2 920,689 + BWI76_RS04455 0.64 +0.0 920,728 + BWI76_RS04455 0.68 -1.1 920,873 + BWI76_RS04455 0.84 -0.3 920,952 + -3.1 921,142 - +0.1
Or see this region's nucleotide sequence