Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03810 and BWI76_RS03815 are separated by 11 nucleotides BWI76_RS03815 and BWI76_RS03820 are separated by 109 nucleotides
BWI76_RS03810: BWI76_RS03810 - GTPase, at 787,632 to 788,588
_RS03810
BWI76_RS03815: BWI76_RS03815 - hypothetical protein, at 788,600 to 788,803
_RS03815
BWI76_RS03820: BWI76_RS03820 - carbon starvation protein A, at 788,913 to 791,063
_RS03820
Position (kb) 788
789 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 787.738 kb on - strand, within BWI76_RS03810 at 787.850 kb on + strand, within BWI76_RS03810 at 788.073 kb on - strand, within BWI76_RS03810 at 788.075 kb on - strand, within BWI76_RS03810 at 788.199 kb on + strand, within BWI76_RS03810 at 788.286 kb on - strand, within BWI76_RS03810 at 788.320 kb on - strand, within BWI76_RS03810 at 788.365 kb on + strand, within BWI76_RS03810 at 788.413 kb on + strand, within BWI76_RS03810 at 788.421 kb on - strand, within BWI76_RS03810 at 788.423 kb on + strand, within BWI76_RS03810 at 788.524 kb on - strand at 788.590 kb on - strand at 788.697 kb on + strand, within BWI76_RS03815 at 788.707 kb on + strand, within BWI76_RS03815 at 788.831 kb on + strand at 788.844 kb on + strand at 788.852 kb on - strand at 788.891 kb on - strand at 788.992 kb on - strand at 789.068 kb on - strand at 789.076 kb on + strand at 789.199 kb on + strand, within BWI76_RS03820 at 789.207 kb on - strand, within BWI76_RS03820 at 789.207 kb on - strand, within BWI76_RS03820 at 789.207 kb on - strand, within BWI76_RS03820 at 789.240 kb on - strand, within BWI76_RS03820 at 789.302 kb on + strand, within BWI76_RS03820 at 789.310 kb on - strand, within BWI76_RS03820 at 789.310 kb on - strand, within BWI76_RS03820 at 789.310 kb on - strand, within BWI76_RS03820 at 789.518 kb on + strand, within BWI76_RS03820 at 789.681 kb on + strand, within BWI76_RS03820 at 789.689 kb on - strand, within BWI76_RS03820
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB31 MOI 1 remove 787,738 - BWI76_RS03810 0.11 +0.4 787,850 + BWI76_RS03810 0.23 +2.0 788,073 - BWI76_RS03810 0.46 -0.7 788,075 - BWI76_RS03810 0.46 +1.4 788,199 + BWI76_RS03810 0.59 -1.8 788,286 - BWI76_RS03810 0.68 -0.0 788,320 - BWI76_RS03810 0.72 +0.4 788,365 + BWI76_RS03810 0.77 +0.5 788,413 + BWI76_RS03810 0.82 +0.0 788,421 - BWI76_RS03810 0.82 +0.2 788,423 + BWI76_RS03810 0.83 +1.6 788,524 - -0.2 788,590 - +1.0 788,697 + BWI76_RS03815 0.48 +0.6 788,707 + BWI76_RS03815 0.52 +2.7 788,831 + -0.5 788,844 + -0.1 788,852 - -0.5 788,891 - -0.2 788,992 - -0.1 789,068 - +3.0 789,076 + -1.4 789,199 + BWI76_RS03820 0.13 -1.2 789,207 - BWI76_RS03820 0.14 +0.5 789,207 - BWI76_RS03820 0.14 -0.1 789,207 - BWI76_RS03820 0.14 +0.3 789,240 - BWI76_RS03820 0.15 +1.1 789,302 + BWI76_RS03820 0.18 +0.2 789,310 - BWI76_RS03820 0.18 +0.9 789,310 - BWI76_RS03820 0.18 +0.6 789,310 - BWI76_RS03820 0.18 -0.5 789,518 + BWI76_RS03820 0.28 +0.4 789,681 + BWI76_RS03820 0.36 -0.2 789,689 - BWI76_RS03820 0.36 -1.7
Or see this region's nucleotide sequence