Experiment: KLEB31 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02960 and BWI76_RS02965 are separated by 52 nucleotides BWI76_RS02965 and BWI76_RS02970 are separated by 131 nucleotides
BWI76_RS02960: BWI76_RS02960 - glucohydrolase, at 605,652 to 607,307
_RS02960
BWI76_RS02965: BWI76_RS02965 - PTS trehalose transporter subunit IIBC, at 607,360 to 608,778
_RS02965
BWI76_RS02970: BWI76_RS02970 - trehalose operon repressor, at 608,910 to 609,857
_RS02970
Position (kb) 607
608
609 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 607.490 kb on + strand at 607.733 kb on + strand, within BWI76_RS02965 at 607.813 kb on + strand, within BWI76_RS02965 at 607.883 kb on - strand at 607.907 kb on + strand, within BWI76_RS02965 at 607.912 kb on + strand, within BWI76_RS02965 at 607.915 kb on - strand, within BWI76_RS02965 at 608.178 kb on + strand, within BWI76_RS02965 at 608.408 kb on + strand, within BWI76_RS02965 at 608.534 kb on + strand, within BWI76_RS02965 at 608.549 kb on + strand at 608.576 kb on - strand, within BWI76_RS02965 at 608.585 kb on + strand, within BWI76_RS02965 at 608.585 kb on + strand, within BWI76_RS02965 at 608.698 kb on - strand at 608.792 kb on - strand at 608.945 kb on + strand at 609.101 kb on + strand, within BWI76_RS02970 at 609.396 kb on - strand, within BWI76_RS02970 at 609.488 kb on + strand, within BWI76_RS02970 at 609.617 kb on - strand, within BWI76_RS02970 at 609.668 kb on - strand, within BWI76_RS02970
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB31 MOI 1 remove 607,490 + +0.7 607,733 + BWI76_RS02965 0.26 +0.9 607,813 + BWI76_RS02965 0.32 +0.5 607,883 - -0.6 607,907 + BWI76_RS02965 0.39 +0.4 607,912 + BWI76_RS02965 0.39 +1.1 607,915 - BWI76_RS02965 0.39 +2.1 608,178 + BWI76_RS02965 0.58 -2.1 608,408 + BWI76_RS02965 0.74 +1.6 608,534 + BWI76_RS02965 0.83 +1.2 608,549 + -0.0 608,576 - BWI76_RS02965 0.86 +0.2 608,585 + BWI76_RS02965 0.86 -0.6 608,585 + BWI76_RS02965 0.86 +3.3 608,698 - +0.4 608,792 - -0.0 608,945 + -0.2 609,101 + BWI76_RS02970 0.20 +0.3 609,396 - BWI76_RS02970 0.51 +1.0 609,488 + BWI76_RS02970 0.61 -1.4 609,617 - BWI76_RS02970 0.75 -0.6 609,668 - BWI76_RS02970 0.80 -0.4
Or see this region's nucleotide sequence