Experiment: KLEB30 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26435 and BWI76_RS26440 are separated by 73 nucleotides BWI76_RS26440 and BWI76_RS26445 are separated by 0 nucleotides BWI76_RS26445 and BWI76_RS26450 are separated by 132 nucleotides
BWI76_RS26435: BWI76_RS26435 - hypothetical protein, at 5,471,660 to 5,472,325
_RS26435
BWI76_RS26440: BWI76_RS26440 - hypothetical protein, at 5,472,399 to 5,472,956
_RS26440
BWI76_RS26445: BWI76_RS26445 - MFS transporter, at 5,472,957 to 5,474,177
_RS26445
BWI76_RS26450: BWI76_RS26450 - hypothetical protein, at 5,474,310 to 5,475,359
_RS26450
Position (kb) 5472
5473
5474
5475 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5472.117 kb on + strand, within BWI76_RS26435 at 5472.200 kb on + strand, within BWI76_RS26435 at 5472.320 kb on + strand at 5472.320 kb on + strand at 5472.320 kb on + strand at 5472.328 kb on - strand at 5472.617 kb on + strand, within BWI76_RS26440 at 5472.957 kb on + strand at 5472.957 kb on + strand at 5473.226 kb on + strand, within BWI76_RS26445 at 5473.395 kb on + strand, within BWI76_RS26445 at 5473.403 kb on - strand, within BWI76_RS26445 at 5473.418 kb on - strand, within BWI76_RS26445 at 5473.463 kb on - strand, within BWI76_RS26445 at 5473.524 kb on + strand, within BWI76_RS26445 at 5473.524 kb on + strand, within BWI76_RS26445 at 5473.532 kb on - strand, within BWI76_RS26445 at 5473.532 kb on - strand, within BWI76_RS26445 at 5473.688 kb on - strand, within BWI76_RS26445 at 5473.769 kb on + strand, within BWI76_RS26445 at 5473.791 kb on + strand, within BWI76_RS26445 at 5473.822 kb on + strand, within BWI76_RS26445 at 5474.017 kb on - strand, within BWI76_RS26445 at 5474.137 kb on - strand at 5474.148 kb on - strand at 5474.395 kb on - strand at 5474.440 kb on - strand, within BWI76_RS26450 at 5474.703 kb on - strand, within BWI76_RS26450 at 5474.832 kb on + strand, within BWI76_RS26450 at 5474.875 kb on - strand, within BWI76_RS26450 at 5474.934 kb on - strand, within BWI76_RS26450 at 5474.952 kb on - strand, within BWI76_RS26450 at 5474.952 kb on - strand, within BWI76_RS26450 at 5474.981 kb on + strand, within BWI76_RS26450 at 5474.989 kb on - strand, within BWI76_RS26450 at 5474.989 kb on - strand, within BWI76_RS26450 at 5475.057 kb on + strand, within BWI76_RS26450 at 5475.163 kb on + strand, within BWI76_RS26450
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB30 MOI 1 remove 5,472,117 + BWI76_RS26435 0.69 -0.2 5,472,200 + BWI76_RS26435 0.81 -1.3 5,472,320 + -1.6 5,472,320 + +0.3 5,472,320 + -3.1 5,472,328 - +0.4 5,472,617 + BWI76_RS26440 0.39 +0.6 5,472,957 + -0.5 5,472,957 + -0.1 5,473,226 + BWI76_RS26445 0.22 -0.1 5,473,395 + BWI76_RS26445 0.36 -1.5 5,473,403 - BWI76_RS26445 0.37 +0.2 5,473,418 - BWI76_RS26445 0.38 -1.6 5,473,463 - BWI76_RS26445 0.41 -0.7 5,473,524 + BWI76_RS26445 0.46 +0.0 5,473,524 + BWI76_RS26445 0.46 -1.2 5,473,532 - BWI76_RS26445 0.47 -0.1 5,473,532 - BWI76_RS26445 0.47 -0.5 5,473,688 - BWI76_RS26445 0.60 -1.1 5,473,769 + BWI76_RS26445 0.67 -1.0 5,473,791 + BWI76_RS26445 0.68 -0.5 5,473,822 + BWI76_RS26445 0.71 -0.1 5,474,017 - BWI76_RS26445 0.87 -0.5 5,474,137 - +1.0 5,474,148 - +0.5 5,474,395 - +0.6 5,474,440 - BWI76_RS26450 0.12 +1.2 5,474,703 - BWI76_RS26450 0.37 -1.0 5,474,832 + BWI76_RS26450 0.50 -0.7 5,474,875 - BWI76_RS26450 0.54 +0.0 5,474,934 - BWI76_RS26450 0.59 +0.2 5,474,952 - BWI76_RS26450 0.61 -1.6 5,474,952 - BWI76_RS26450 0.61 -1.1 5,474,981 + BWI76_RS26450 0.64 -0.0 5,474,989 - BWI76_RS26450 0.65 +2.2 5,474,989 - BWI76_RS26450 0.65 -0.0 5,475,057 + BWI76_RS26450 0.71 +1.1 5,475,163 + BWI76_RS26450 0.81 -0.2
Or see this region's nucleotide sequence