Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19745

Experiment: KLEB30 MOI 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19740 and BWI76_RS19745 are separated by 25 nucleotidesBWI76_RS19745 and BWI76_RS19750 are separated by 148 nucleotides BWI76_RS19740: BWI76_RS19740 - sugar efflux transporter SetB, at 4,127,057 to 4,128,238 _RS19740 BWI76_RS19745: BWI76_RS19745 - zinc/iron-chelating domain-containing protein, at 4,128,264 to 4,128,518 _RS19745 BWI76_RS19750: BWI76_RS19750 - elongation factor P-like protein YeiP, at 4,128,667 to 4,129,239 _RS19750 Position (kb) 4128 4129Strain fitness (log2 ratio) -2 -1 0 1 2at 4127.545 kb on - strand, within BWI76_RS19740at 4127.844 kb on + strand, within BWI76_RS19740at 4128.187 kb on + strandat 4128.208 kb on + strandat 4128.281 kb on + strandat 4128.561 kb on - strandat 4128.644 kb on + strandat 4128.794 kb on + strand, within BWI76_RS19750at 4128.963 kb on + strand, within BWI76_RS19750at 4129.178 kb on + strand, within BWI76_RS19750

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB30 MOI 1
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4,127,545 - BWI76_RS19740 0.41 +1.4
4,127,844 + BWI76_RS19740 0.67 -0.4
4,128,187 + -0.6
4,128,208 + -0.7
4,128,281 + +1.9
4,128,561 - -1.6
4,128,644 + -0.1
4,128,794 + BWI76_RS19750 0.22 -0.7
4,128,963 + BWI76_RS19750 0.52 -0.7
4,129,178 + BWI76_RS19750 0.89 -2.6

Or see this region's nucleotide sequence