Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19350

Experiment: KLEB30 MOI 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19345 and BWI76_RS19350 are separated by 206 nucleotidesBWI76_RS19350 and BWI76_RS19355 are separated by 21 nucleotides BWI76_RS19345: BWI76_RS19345 - D-arabinitol 4-dehydrogenase, at 4,030,907 to 4,032,274 _RS19345 BWI76_RS19350: BWI76_RS19350 - DeoR family transcriptional regulator, at 4,032,481 to 4,033,422 _RS19350 BWI76_RS19355: BWI76_RS19355 - LacI family transcriptional regulator, at 4,033,444 to 4,034,445 _RS19355 Position (kb) 4032 4033 4034Strain fitness (log2 ratio) -2 -1 0 1at 4031.779 kb on + strand, within BWI76_RS19345at 4031.975 kb on - strand, within BWI76_RS19345at 4032.236 kb on + strandat 4033.038 kb on - strand, within BWI76_RS19350at 4033.353 kb on + strandat 4033.604 kb on - strand, within BWI76_RS19355at 4034.000 kb on + strand, within BWI76_RS19355

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB30 MOI 1
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4,031,779 + BWI76_RS19345 0.64 +1.5
4,031,975 - BWI76_RS19345 0.78 -0.1
4,032,236 + -0.7
4,033,038 - BWI76_RS19350 0.59 -2.5
4,033,353 + +1.0
4,033,604 - BWI76_RS19355 0.16 +1.4
4,034,000 + BWI76_RS19355 0.55 +0.5

Or see this region's nucleotide sequence