Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07495

Experiment: KLEB30 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KLEB30 MOI 1
1,580,970	+		BWI76_RS07485	0.90	+2.3
1,580,978	-				-3.0
1,580,978	-				+0.0
1,580,982	+				+0.2
1,580,992	-				-0.4
1,581,007	+				+0.3
1,581,015	-				-0.8
1,581,015	-				-1.8
1,581,029	+				-0.1
1,581,154	+		BWI76_RS07490	0.37	-0.1
1,581,156	+		BWI76_RS07490	0.38	-0.2
1,581,156	+		BWI76_RS07490	0.38	+1.6
1,581,156	+		BWI76_RS07490	0.38	+1.0
1,581,164	-		BWI76_RS07490	0.41	+0.9
1,581,164	-		BWI76_RS07490	0.41	-2.0
1,581,174	-		BWI76_RS07490	0.45	-0.1
1,581,184	-		BWI76_RS07490	0.49	+2.4
1,581,211	+		BWI76_RS07490	0.60	-1.5
1,581,213	+		BWI76_RS07490	0.61	-0.6
1,581,219	-		BWI76_RS07490	0.63	-0.5
1,581,225	-		BWI76_RS07490	0.65	+0.1
1,581,254	-		BWI76_RS07490	0.77	-0.4
1,581,259	-		BWI76_RS07490	0.79	-0.8
1,581,279	+		BWI76_RS07490	0.87	+0.1
1,581,279	+		BWI76_RS07490	0.87	-0.6
1,581,281	+		BWI76_RS07490	0.88	-0.1
1,581,287	-				-1.3
1,581,287	-				-1.8
1,581,287	-				+0.5
1,581,353	-				+1.2
1,581,361	+				-0.6
1,581,361	+				+0.1
1,581,369	-				-0.7
1,581,393	+				-0.2
1,581,503	-				+2.6
1,581,527	-				+1.0
1,581,527	-				-0.1
1,581,535	-				-0.6
1,581,565	+				-1.7
1,581,566	+				-0.1
1,581,574	+				-0.1
1,581,574	+				-1.3
1,581,575	-				-1.6
1,581,577	-				+1.5
1,581,578	-				-2.0
1,581,582	-				+0.6
1,581,582	-				-0.0
1,581,582	-				-0.4
1,581,582	-				-0.0
1,581,582	-				+0.9
1,581,582	-				+1.2
1,581,582	-				+1.4
1,581,597	+				-0.1
1,581,605	-				+0.4
1,581,605	-				-0.0
1,581,615	-				+1.2
1,581,615	-				-0.5
1,581,730	+				+0.1
1,581,750	+				+0.3
1,581,755	+				-0.0
1,581,759	+				+0.3
1,581,768	-				-1.5
1,581,795	+				+1.4
1,581,800	+				-0.7
1,581,837	+				+0.6
1,581,837	+				-1.7
1,581,837	+				+0.6
1,581,837	+				-0.7
1,581,845	-				-0.7
1,581,851	+				-0.7
1,581,851	+				+1.9
1,581,859	-				+0.0
1,581,859	-				+0.8
1,581,861	+				-1.5
1,581,864	+				+1.4
1,581,864	+				+0.5
1,581,864	+				+0.1
1,581,864	+				-0.5
1,581,864	+				-0.9
1,581,866	+				+0.4
1,581,866	+				-1.5
1,581,869	-				+0.7
1,581,872	-				-1.1
1,581,872	-				+0.1
1,581,872	-				+0.1
1,581,874	-				-0.4
1,581,874	-				+0.0
1,581,876	+				+0.6
1,581,876	+				-0.4
1,581,879	-				-0.8
1,581,884	-				+0.1
1,581,884	-				-0.5
1,581,885	-				-0.5
1,581,887	+				-1.5
1,581,895	-				-0.5
1,581,895	-				+0.1
1,581,898	+				-0.1
1,581,906	-				+0.9
1,581,906	-				+0.5
1,581,906	-				+0.6
1,581,906	-				-0.2
1,581,906	-				-0.6
1,581,908	-				+0.3
1,581,935	+				-0.6
1,582,018	+				+0.7
1,582,253	-		BWI76_RS07495	0.17	-1.2
1,582,253	-		BWI76_RS07495	0.17	-0.7
1,582,908	-		BWI76_RS07495	0.41	+3.2
1,582,914	+		BWI76_RS07495	0.41	-0.0
1,582,928	+		BWI76_RS07495	0.41	+0.0
1,583,314	-		BWI76_RS07495	0.55	-0.3
1,583,346	-		BWI76_RS07495	0.57	-1.7
1,583,384	+		BWI76_RS07495	0.58	+1.0
1,583,675	-		BWI76_RS07495	0.69	-1.1
1,583,697	-		BWI76_RS07495	0.70	-0.8
1,584,078	-		BWI76_RS07495	0.84	-0.5
1,584,085	-		BWI76_RS07495	0.84	-0.5
1,584,258	+				+1.1
1,584,258	-				+1.1
1,584,309	+				+1.0
1,584,309	+				-1.0
1,584,317	-				+0.9
1,584,674	+				+2.4
1,584,760	-		BWI76_RS07500	0.15	+0.3
1,584,862	+		BWI76_RS07500	0.25	-0.3
1,584,862	+		BWI76_RS07500	0.25	+1.1
1,584,901	-		BWI76_RS07500	0.28	-3.0
1,585,379	+		BWI76_RS07500	0.72	+0.8
1,585,525	+		BWI76_RS07500	0.86	+0.7