Experiment: KLEB30 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03055 and BWI76_RS03060 are separated by 42 nucleotides BWI76_RS03060 and BWI76_RS03065 are separated by 86 nucleotides
BWI76_RS03055: BWI76_RS03055 - LPS export ABC transporter permease LptG, at 625,303 to 626,385
_RS03055
BWI76_RS03060: BWI76_RS03060 - ATP-binding protein, at 626,428 to 627,930
_RS03060
BWI76_RS03065: BWI76_RS03065 - hypothetical protein, at 628,017 to 628,838
_RS03065
Position (kb) 626
627
628 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 626.563 kb on - strand at 626.650 kb on + strand, within BWI76_RS03060 at 626.658 kb on - strand, within BWI76_RS03060 at 626.660 kb on + strand, within BWI76_RS03060 at 626.842 kb on + strand, within BWI76_RS03060 at 627.000 kb on - strand, within BWI76_RS03060 at 627.050 kb on + strand, within BWI76_RS03060 at 627.250 kb on - strand, within BWI76_RS03060 at 627.315 kb on - strand, within BWI76_RS03060 at 627.315 kb on - strand, within BWI76_RS03060 at 627.315 kb on - strand, within BWI76_RS03060 at 627.357 kb on + strand, within BWI76_RS03060 at 627.357 kb on + strand, within BWI76_RS03060 at 627.357 kb on + strand, within BWI76_RS03060 at 627.510 kb on - strand, within BWI76_RS03060 at 627.546 kb on - strand, within BWI76_RS03060 at 627.715 kb on + strand, within BWI76_RS03060 at 627.890 kb on + strand at 628.034 kb on + strand at 628.225 kb on - strand, within BWI76_RS03065 at 628.343 kb on + strand, within BWI76_RS03065 at 628.375 kb on - strand, within BWI76_RS03065 at 628.385 kb on + strand, within BWI76_RS03065 at 628.595 kb on + strand, within BWI76_RS03065 at 628.603 kb on - strand, within BWI76_RS03065 at 628.610 kb on + strand, within BWI76_RS03065 at 628.625 kb on - strand, within BWI76_RS03065 at 628.625 kb on - strand, within BWI76_RS03065 at 628.634 kb on + strand, within BWI76_RS03065 at 628.727 kb on - strand, within BWI76_RS03065 at 628.738 kb on - strand, within BWI76_RS03065 at 628.743 kb on - strand, within BWI76_RS03065 at 628.745 kb on + strand, within BWI76_RS03065
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB30 MOI 1 remove 626,563 - -0.8 626,650 + BWI76_RS03060 0.15 +0.9 626,658 - BWI76_RS03060 0.15 -0.0 626,660 + BWI76_RS03060 0.15 -0.2 626,842 + BWI76_RS03060 0.28 -1.5 627,000 - BWI76_RS03060 0.38 -0.3 627,050 + BWI76_RS03060 0.41 -2.2 627,250 - BWI76_RS03060 0.55 -2.0 627,315 - BWI76_RS03060 0.59 +0.2 627,315 - BWI76_RS03060 0.59 +0.9 627,315 - BWI76_RS03060 0.59 -0.4 627,357 + BWI76_RS03060 0.62 -0.9 627,357 + BWI76_RS03060 0.62 -0.5 627,357 + BWI76_RS03060 0.62 -0.9 627,510 - BWI76_RS03060 0.72 -0.5 627,546 - BWI76_RS03060 0.74 -0.4 627,715 + BWI76_RS03060 0.86 +0.8 627,890 + -2.9 628,034 + -0.6 628,225 - BWI76_RS03065 0.25 +0.7 628,343 + BWI76_RS03065 0.40 -0.2 628,375 - BWI76_RS03065 0.44 +2.8 628,385 + BWI76_RS03065 0.45 -1.3 628,595 + BWI76_RS03065 0.70 +0.7 628,603 - BWI76_RS03065 0.71 -0.3 628,610 + BWI76_RS03065 0.72 +1.1 628,625 - BWI76_RS03065 0.74 -0.1 628,625 - BWI76_RS03065 0.74 -0.2 628,634 + BWI76_RS03065 0.75 +0.5 628,727 - BWI76_RS03065 0.86 -0.5 628,738 - BWI76_RS03065 0.88 -1.5 628,743 - BWI76_RS03065 0.88 -0.6 628,745 + BWI76_RS03065 0.89 -1.5
Or see this region's nucleotide sequence