Experiment: KLEB30 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26005 and BWI76_RS26010 are separated by 31 nucleotides BWI76_RS26010 and BWI76_RS26015 overlap by 11 nucleotides BWI76_RS26015 and BWI76_RS26020 are separated by 108 nucleotides BWI76_RS26020 and BWI76_RS26025 are separated by 277 nucleotides
BWI76_RS26005: BWI76_RS26005 - glutamine amidotransferase, at 5,375,157 to 5,375,720
_RS26005
BWI76_RS26010: BWI76_RS26010 - cell filamentation protein Fic, at 5,375,752 to 5,376,354
_RS26010
BWI76_RS26015: BWI76_RS26015 - DUF2559 domain-containing protein, at 5,376,344 to 5,376,511
_RS26015
BWI76_RS26020: BWI76_RS26020 - peptidylprolyl isomerase A, at 5,376,620 to 5,377,189
_RS26020
BWI76_RS26025: BWI76_RS26025 - MFS transporter TsgA, at 5,377,467 to 5,378,651
_RS26025
Position (kb) 5376
5377 Strain fitness (log2 ratio) -2
-1
0
1 at 5375.367 kb on - strand, within BWI76_RS26005 at 5375.781 kb on - strand at 5375.781 kb on - strand at 5375.850 kb on - strand, within BWI76_RS26010 at 5375.870 kb on - strand, within BWI76_RS26010 at 5375.982 kb on - strand, within BWI76_RS26010 at 5376.018 kb on + strand, within BWI76_RS26010 at 5376.137 kb on - strand, within BWI76_RS26010 at 5376.275 kb on + strand, within BWI76_RS26010 at 5376.299 kb on + strand at 5376.307 kb on - strand at 5376.388 kb on - strand, within BWI76_RS26015 at 5376.602 kb on - strand at 5376.626 kb on - strand at 5376.662 kb on - strand at 5376.679 kb on + strand, within BWI76_RS26020 at 5376.730 kb on - strand, within BWI76_RS26020 at 5376.751 kb on - strand, within BWI76_RS26020 at 5376.825 kb on - strand, within BWI76_RS26020 at 5376.830 kb on + strand, within BWI76_RS26020 at 5376.830 kb on + strand, within BWI76_RS26020 at 5376.830 kb on + strand, within BWI76_RS26020 at 5377.089 kb on - strand, within BWI76_RS26020 at 5377.233 kb on - strand at 5377.282 kb on + strand at 5377.291 kb on - strand at 5377.437 kb on - strand at 5377.448 kb on - strand at 5377.464 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB30 MOI 1 remove 5,375,367 - BWI76_RS26005 0.37 -1.1 5,375,781 - -0.1 5,375,781 - -1.0 5,375,850 - BWI76_RS26010 0.16 -0.8 5,375,870 - BWI76_RS26010 0.20 +0.0 5,375,982 - BWI76_RS26010 0.38 +0.2 5,376,018 + BWI76_RS26010 0.44 -0.6 5,376,137 - BWI76_RS26010 0.64 +0.2 5,376,275 + BWI76_RS26010 0.87 +0.1 5,376,299 + +0.0 5,376,307 - +0.6 5,376,388 - BWI76_RS26015 0.26 -1.3 5,376,602 - -0.2 5,376,626 - -0.6 5,376,662 - +1.1 5,376,679 + BWI76_RS26020 0.10 +0.8 5,376,730 - BWI76_RS26020 0.19 +0.4 5,376,751 - BWI76_RS26020 0.23 -1.1 5,376,825 - BWI76_RS26020 0.36 -0.0 5,376,830 + BWI76_RS26020 0.37 -2.2 5,376,830 + BWI76_RS26020 0.37 +1.2 5,376,830 + BWI76_RS26020 0.37 -0.5 5,377,089 - BWI76_RS26020 0.82 +0.5 5,377,233 - -1.0 5,377,282 + -0.0 5,377,291 - +1.3 5,377,437 - +1.1 5,377,448 - -1.3 5,377,464 + -0.0
Or see this region's nucleotide sequence