Experiment: KLEB30 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24295 and BWI76_RS24300 are separated by 196 nucleotides BWI76_RS24300 and BWI76_RS24305 are separated by 132 nucleotides
BWI76_RS24295: BWI76_RS24295 - AraC family transcriptional regulator, at 5,061,333 to 5,062,232
_RS24295
BWI76_RS24300: BWI76_RS24300 - NADH-dependent alcohol dehydrogenase, at 5,062,429 to 5,063,592
_RS24300
BWI76_RS24305: BWI76_RS24305 - 2,5-didehydrogluconate reductase A, at 5,063,725 to 5,064,552
_RS24305
Position (kb)
5062
5063
5064 Strain fitness (log2 ratio)
-1
0
1 at 5061.432 kb on - strand, within BWI76_RS24295 at 5061.572 kb on + strand, within BWI76_RS24295 at 5061.662 kb on - strand at 5061.719 kb on + strand, within BWI76_RS24295 at 5061.953 kb on + strand, within BWI76_RS24295 at 5062.013 kb on + strand, within BWI76_RS24295 at 5062.126 kb on - strand, within BWI76_RS24295 at 5062.149 kb on - strand at 5062.252 kb on - strand at 5062.717 kb on + strand, within BWI76_RS24300 at 5062.763 kb on - strand, within BWI76_RS24300 at 5062.973 kb on - strand, within BWI76_RS24300 at 5063.100 kb on + strand, within BWI76_RS24300 at 5063.108 kb on - strand, within BWI76_RS24300 at 5063.214 kb on + strand, within BWI76_RS24300 at 5063.272 kb on + strand, within BWI76_RS24300 at 5063.389 kb on - strand, within BWI76_RS24300 at 5063.638 kb on - strand at 5063.646 kb on + strand at 5063.666 kb on + strand at 5063.674 kb on - strand at 5063.710 kb on - strand at 5063.763 kb on + strand at 5063.783 kb on - strand at 5063.910 kb on - strand, within BWI76_RS24305 at 5063.912 kb on + strand, within BWI76_RS24305 at 5063.920 kb on - strand, within BWI76_RS24305 at 5063.976 kb on + strand, within BWI76_RS24305 at 5063.976 kb on + strand, within BWI76_RS24305 at 5064.083 kb on + strand, within BWI76_RS24305 at 5064.307 kb on + strand, within BWI76_RS24305 at 5064.385 kb on + strand, within BWI76_RS24305 at 5064.385 kb on + strand, within BWI76_RS24305 at 5064.385 kb on + strand, within BWI76_RS24305 at 5064.510 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB30 MOI 1 remove 5,061,432 - BWI76_RS24295 0.11 -0.3 5,061,572 + BWI76_RS24295 0.27 -0.5 5,061,662 - -0.6 5,061,719 + BWI76_RS24295 0.43 +1.5 5,061,953 + BWI76_RS24295 0.69 +0.4 5,062,013 + BWI76_RS24295 0.76 +1.4 5,062,126 - BWI76_RS24295 0.88 -0.2 5,062,149 - -0.6 5,062,252 - -0.2 5,062,717 + BWI76_RS24300 0.25 +0.7 5,062,763 - BWI76_RS24300 0.29 +0.2 5,062,973 - BWI76_RS24300 0.47 -0.1 5,063,100 + BWI76_RS24300 0.58 +1.1 5,063,108 - BWI76_RS24300 0.58 +1.3 5,063,214 + BWI76_RS24300 0.67 -0.4 5,063,272 + BWI76_RS24300 0.72 +0.9 5,063,389 - BWI76_RS24300 0.82 -1.0 5,063,638 - -1.4 5,063,646 + -0.0 5,063,666 + -0.3 5,063,674 - +0.9 5,063,710 - +0.8 5,063,763 + -0.7 5,063,783 - -0.5 5,063,910 - BWI76_RS24305 0.22 -0.4 5,063,912 + BWI76_RS24305 0.23 +0.4 5,063,920 - BWI76_RS24305 0.24 +0.4 5,063,976 + BWI76_RS24305 0.30 -0.0 5,063,976 + BWI76_RS24305 0.30 -0.1 5,064,083 + BWI76_RS24305 0.43 +0.7 5,064,307 + BWI76_RS24305 0.70 +0.8 5,064,385 + BWI76_RS24305 0.80 -0.9 5,064,385 + BWI76_RS24305 0.80 +1.6 5,064,385 + BWI76_RS24305 0.80 +0.6 5,064,510 + -0.7
Or see this region's nucleotide sequence