Experiment: KLEB30 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21550 and BWI76_RS21555 are separated by 13 nucleotides BWI76_RS21555 and BWI76_RS21560 are separated by 86 nucleotides BWI76_RS21560 and BWI76_RS21565 are separated by 147 nucleotides BWI76_RS21565 and BWI76_RS21570 are separated by 65 nucleotides BWI76_RS21570 and BWI76_RS21575 overlap by 11 nucleotides
BWI76_RS21550: BWI76_RS21550 - inorganic polyphosphate kinase, at 4,511,927 to 4,512,073
_RS21550
BWI76_RS21555: BWI76_RS21555 - NAD(+) kinase, at 4,512,087 to 4,512,965
_RS21555
BWI76_RS21560: BWI76_RS21560 - DNA repair protein RecN, at 4,513,052 to 4,514,713
_RS21560
BWI76_RS21565: BWI76_RS21565 - outer membrane protein assembly factor BamE, at 4,514,861 to 4,515,202
_RS21565
BWI76_RS21570: BWI76_RS21570 - RnfH family protein, at 4,515,268 to 4,515,558
_RS21570
BWI76_RS21575: BWI76_RS21575 - hypothetical protein, at 4,515,548 to 4,516,024
_RS21575
Position (kb) 4513
4514
4515 Strain fitness (log2 ratio) -1
0
1 at 4513.141 kb on + strand at 4513.141 kb on + strand at 4513.823 kb on + strand, within BWI76_RS21560 at 4513.838 kb on - strand, within BWI76_RS21560 at 4514.133 kb on - strand, within BWI76_RS21560 at 4514.506 kb on + strand, within BWI76_RS21560 at 4514.549 kb on - strand at 4514.600 kb on + strand at 4514.822 kb on + strand at 4515.166 kb on - strand, within BWI76_RS21565 at 4515.280 kb on + strand at 4515.361 kb on - strand at 4515.402 kb on + strand, within BWI76_RS21570 at 4515.489 kb on + strand, within BWI76_RS21570 at 4515.558 kb on + strand at 4515.566 kb on - strand at 4515.566 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB30 MOI 1 remove 4,513,141 + -0.4 4,513,141 + -0.5 4,513,823 + BWI76_RS21560 0.46 -0.9 4,513,838 - BWI76_RS21560 0.47 -0.8 4,514,133 - BWI76_RS21560 0.65 -1.4 4,514,506 + BWI76_RS21560 0.87 -1.2 4,514,549 - +0.5 4,514,600 + -0.5 4,514,822 + +0.2 4,515,166 - BWI76_RS21565 0.89 +0.2 4,515,280 + +0.4 4,515,361 - +0.4 4,515,402 + BWI76_RS21570 0.46 +0.3 4,515,489 + BWI76_RS21570 0.76 +0.6 4,515,558 + -0.2 4,515,566 - -1.1 4,515,566 - +1.0
Or see this region's nucleotide sequence