Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20390
Experiment: KLEB30 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB30 MOI 1 |
---|---|---|---|---|---|
remove | |||||
4,266,788 | + | -1.8 | |||
4,266,793 | + | -3.6 | |||
4,266,921 | + | BWI76_RS20385 | 0.21 | -2.1 | |
4,266,974 | - | BWI76_RS20385 | 0.26 | -0.3 | |
4,267,035 | - | BWI76_RS20385 | 0.32 | +0.1 | |
4,267,590 | - | BWI76_RS20385 | 0.87 | +0.8 | |
4,267,854 | - | -0.7 | |||
4,268,307 | + | BWI76_RS20390 | 0.46 | -0.8 | |
4,268,380 | + | BWI76_RS20390 | 0.53 | -2.1 | |
4,268,541 | - | BWI76_RS20390 | 0.67 | +1.0 | |
4,268,862 | - | -0.9 | |||
4,268,920 | + | +0.0 | |||
4,268,928 | - | +0.1 | |||
4,268,929 | - | +0.8 | |||
4,269,020 | + | -0.1 | |||
4,269,086 | - | -0.2 | |||
4,269,090 | + | -0.3 | |||
4,269,093 | - | +0.9 | |||
4,269,145 | - | BWI76_RS20395 | 0.12 | -0.2 | |
4,269,174 | + | BWI76_RS20395 | 0.15 | -0.9 | |
4,269,236 | + | BWI76_RS20395 | 0.22 | -0.7 | |
4,269,419 | + | BWI76_RS20395 | 0.41 | +0.2 | |
4,269,516 | - | BWI76_RS20395 | 0.51 | +1.8 | |
4,269,722 | - | BWI76_RS20395 | 0.72 | +0.7 |
Or see this region's nucleotide sequence