Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18125

Experiment: KLEB30 MOI 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS18120 and BWI76_RS18125 are separated by 117 nucleotidesBWI76_RS18125 and BWI76_RS18130 are separated by 15 nucleotides BWI76_RS18120: BWI76_RS18120 - lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase, at 3,766,221 to 3,767,195 _RS18120 BWI76_RS18125: BWI76_RS18125 - murein DD-endopeptidase MepM, at 3,767,313 to 3,768,635 _RS18125 BWI76_RS18130: BWI76_RS18130 - zinc ABC transporter substrate-binding protein, at 3,768,651 to 3,769,595 _RS18130 Position (kb) 3767 3768 3769Strain fitness (log2 ratio) -2 -1 0 1 2at 3767.294 kb on + strandat 3767.432 kb on + strandat 3767.635 kb on - strand, within BWI76_RS18125at 3767.853 kb on - strand, within BWI76_RS18125at 3768.428 kb on + strand, within BWI76_RS18125at 3768.489 kb on - strand, within BWI76_RS18125at 3769.014 kb on - strand, within BWI76_RS18130at 3769.014 kb on - strand, within BWI76_RS18130at 3769.370 kb on - strand, within BWI76_RS18130

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB30 MOI 1
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3,767,294 + -1.4
3,767,432 + -0.1
3,767,635 - BWI76_RS18125 0.24 +0.4
3,767,853 - BWI76_RS18125 0.41 +0.6
3,768,428 + BWI76_RS18125 0.84 +0.9
3,768,489 - BWI76_RS18125 0.89 +2.1
3,769,014 - BWI76_RS18130 0.38 -1.3
3,769,014 - BWI76_RS18130 0.38 -1.2
3,769,370 - BWI76_RS18130 0.76 -1.9

Or see this region's nucleotide sequence