Experiment: KLEB30 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17290 and BWI76_RS17295 are separated by 159 nucleotides BWI76_RS17295 and BWI76_RS17300 are separated by 35 nucleotides BWI76_RS17300 and BWI76_RS17310 are separated by 282 nucleotides BWI76_RS17310 and BWI76_RS17315 are separated by 107 nucleotides
BWI76_RS17290: BWI76_RS17290 - formyltetrahydrofolate deformylase, at 3,582,460 to 3,583,302
_RS17290
BWI76_RS17295: BWI76_RS17295 - tRNA-Tyr, at 3,583,462 to 3,583,546
_RS17295
BWI76_RS17300: BWI76_RS17300 - tRNA-Tyr, at 3,583,582 to 3,583,666
_RS17300
BWI76_RS17310: BWI76_RS17310 - AsnC family transcriptional regulator, at 3,583,949 to 3,584,392
_RS17310
BWI76_RS17315: BWI76_RS17315 - EamA family transporter, at 3,584,500 to 3,585,395
_RS17315
BWI76_RS17320: BWI76_RS17320 - respiratory nitrate reductase subunit gamma, at 3,585,392 to 3,586,069
_RS17320
Position (kb)
3583
3584
3585 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3583.036 kb on - strand, within BWI76_RS17290 at 3583.176 kb on + strand, within BWI76_RS17290 at 3583.443 kb on + strand at 3583.607 kb on - strand, within BWI76_RS17300 at 3583.622 kb on - strand, within BWI76_RS17300 at 3583.819 kb on + strand at 3583.905 kb on + strand at 3583.967 kb on + strand at 3584.037 kb on + strand, within BWI76_RS17310 at 3584.196 kb on + strand, within BWI76_RS17310 at 3584.209 kb on - strand, within BWI76_RS17310 at 3584.262 kb on - strand, within BWI76_RS17310 at 3584.262 kb on - strand, within BWI76_RS17310 at 3584.479 kb on - strand at 3584.626 kb on - strand, within BWI76_RS17315 at 3584.697 kb on + strand, within BWI76_RS17315 at 3584.793 kb on + strand, within BWI76_RS17315 at 3584.798 kb on + strand, within BWI76_RS17315 at 3584.801 kb on - strand, within BWI76_RS17315 at 3584.807 kb on - strand, within BWI76_RS17315 at 3585.328 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB30 MOI 1 remove 3,583,036 - BWI76_RS17290 0.68 +0.0 3,583,176 + BWI76_RS17290 0.85 -0.7 3,583,443 + +0.9 3,583,607 - BWI76_RS17300 0.29 +0.5 3,583,622 - BWI76_RS17300 0.47 -0.9 3,583,819 + +1.9 3,583,905 + +0.9 3,583,967 + +2.5 3,584,037 + BWI76_RS17310 0.20 -0.7 3,584,196 + BWI76_RS17310 0.56 -1.6 3,584,209 - BWI76_RS17310 0.59 -1.7 3,584,262 - BWI76_RS17310 0.70 -0.1 3,584,262 - BWI76_RS17310 0.70 -0.5 3,584,479 - -2.6 3,584,626 - BWI76_RS17315 0.14 -0.3 3,584,697 + BWI76_RS17315 0.22 +1.3 3,584,793 + BWI76_RS17315 0.33 +1.6 3,584,798 + BWI76_RS17315 0.33 -1.5 3,584,801 - BWI76_RS17315 0.34 +2.5 3,584,807 - BWI76_RS17315 0.34 -1.7 3,585,328 + -0.3
Or see this region's nucleotide sequence