Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16195

Experiment: KLEB30 MOI 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS16190 and BWI76_RS16195 are separated by 127 nucleotidesBWI76_RS16195 and BWI76_RS16200 are separated by 145 nucleotides BWI76_RS16190: BWI76_RS16190 - universal stress protein UspE, at 3,359,475 to 3,360,425 _RS16190 BWI76_RS16195: BWI76_RS16195 - hypothetical protein, at 3,360,553 to 3,360,741 _RS16195 BWI76_RS16200: BWI76_RS16200 - NAD(P) transhydrogenase subunit beta, at 3,360,887 to 3,362,275 _RS16200 Position (kb) 3360 3361Strain fitness (log2 ratio) -3 -2 -1 0 1at 3359.640 kb on - strand, within BWI76_RS16190at 3359.640 kb on - strand, within BWI76_RS16190at 3359.753 kb on - strand, within BWI76_RS16190at 3360.571 kb on - strandat 3360.590 kb on + strand, within BWI76_RS16195at 3360.681 kb on - strand, within BWI76_RS16195at 3360.892 kb on - strandat 3361.117 kb on + strand, within BWI76_RS16200at 3361.714 kb on + strand, within BWI76_RS16200

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB30 MOI 1
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3,359,640 - BWI76_RS16190 0.17 +0.1
3,359,640 - BWI76_RS16190 0.17 +0.6
3,359,753 - BWI76_RS16190 0.29 -0.6
3,360,571 - -0.1
3,360,590 + BWI76_RS16195 0.20 +0.6
3,360,681 - BWI76_RS16195 0.68 -3.3
3,360,892 - -0.4
3,361,117 + BWI76_RS16200 0.17 -1.3
3,361,714 + BWI76_RS16200 0.60 +0.1

Or see this region's nucleotide sequence