Experiment: KLEB30 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13870 and BWI76_RS13875 are separated by 189 nucleotides BWI76_RS13875 and BWI76_RS13880 are separated by 44 nucleotides BWI76_RS13880 and BWI76_RS13885 are separated by 85 nucleotides
BWI76_RS13870: BWI76_RS13870 - hypothetical protein, at 2,892,522 to 2,893,439
_RS13870
BWI76_RS13875: BWI76_RS13875 - CbbBc protein, at 2,893,629 to 2,895,929
_RS13875
BWI76_RS13880: BWI76_RS13880 - lysine transporter LysE, at 2,895,974 to 2,896,591
_RS13880
BWI76_RS13885: BWI76_RS13885 - AraC family transcriptional regulator, at 2,896,677 to 2,897,489
_RS13885
Position (kb)
2893
2894
2895
2896 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2892.643 kb on + strand, within BWI76_RS13870 at 2892.667 kb on + strand, within BWI76_RS13870 at 2892.734 kb on + strand, within BWI76_RS13870 at 2892.913 kb on + strand, within BWI76_RS13870 at 2893.156 kb on + strand, within BWI76_RS13870 at 2893.192 kb on - strand, within BWI76_RS13870 at 2893.354 kb on - strand at 2893.496 kb on + strand at 2893.505 kb on + strand at 2893.584 kb on + strand at 2893.867 kb on + strand, within BWI76_RS13875 at 2894.211 kb on - strand, within BWI76_RS13875 at 2894.583 kb on + strand, within BWI76_RS13875 at 2895.073 kb on + strand, within BWI76_RS13875 at 2895.274 kb on + strand, within BWI76_RS13875 at 2895.397 kb on + strand, within BWI76_RS13875 at 2895.561 kb on + strand, within BWI76_RS13875 at 2895.792 kb on - strand at 2896.045 kb on + strand, within BWI76_RS13880 at 2896.468 kb on - strand, within BWI76_RS13880 at 2896.549 kb on - strand at 2896.575 kb on + strand at 2896.628 kb on - strand at 2896.632 kb on + strand at 2896.708 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB30 MOI 1 remove 2,892,643 + BWI76_RS13870 0.13 +1.7 2,892,667 + BWI76_RS13870 0.16 +0.0 2,892,734 + BWI76_RS13870 0.23 -2.0 2,892,913 + BWI76_RS13870 0.43 -0.3 2,893,156 + BWI76_RS13870 0.69 +1.3 2,893,192 - BWI76_RS13870 0.73 +0.2 2,893,354 - +3.4 2,893,496 + -0.1 2,893,505 + -0.0 2,893,584 + -0.2 2,893,867 + BWI76_RS13875 0.10 -1.0 2,894,211 - BWI76_RS13875 0.25 -0.6 2,894,583 + BWI76_RS13875 0.41 -0.4 2,895,073 + BWI76_RS13875 0.63 -0.7 2,895,274 + BWI76_RS13875 0.71 -1.6 2,895,397 + BWI76_RS13875 0.77 -0.0 2,895,561 + BWI76_RS13875 0.84 -0.2 2,895,792 - +0.1 2,896,045 + BWI76_RS13880 0.11 -1.0 2,896,468 - BWI76_RS13880 0.80 -0.5 2,896,549 - +0.5 2,896,575 + +0.1 2,896,628 - +0.6 2,896,632 + +1.1 2,896,708 - +1.6
Or see this region's nucleotide sequence