Experiment: KLEB30 MOI 1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13795 and BWI76_RS13800 are separated by 383 nucleotides BWI76_RS13800 and BWI76_RS13805 are separated by 255 nucleotides
BWI76_RS13795: BWI76_RS13795 - ABC transporter substrate binding protein, at 2,876,488 to 2,878,110
_RS13795
BWI76_RS13800: BWI76_RS13800 - zinc-dependent alcohol dehydrogenase, at 2,878,494 to 2,879,504
_RS13800
BWI76_RS13805: BWI76_RS13805 - inorganic diphosphatase, at 2,879,760 to 2,880,359
_RS13805
Position (kb)
2878
2879
2880 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2877.808 kb on + strand, within BWI76_RS13795 at 2877.808 kb on + strand, within BWI76_RS13795 at 2877.816 kb on - strand, within BWI76_RS13795 at 2877.816 kb on - strand, within BWI76_RS13795 at 2878.274 kb on - strand at 2878.320 kb on + strand at 2878.322 kb on - strand at 2878.326 kb on + strand at 2878.419 kb on + strand at 2878.514 kb on + strand at 2878.537 kb on + strand at 2878.670 kb on + strand, within BWI76_RS13800 at 2878.680 kb on + strand, within BWI76_RS13800 at 2878.925 kb on + strand, within BWI76_RS13800 at 2878.968 kb on + strand, within BWI76_RS13800 at 2879.023 kb on + strand, within BWI76_RS13800 at 2879.287 kb on - strand, within BWI76_RS13800 at 2879.342 kb on - strand, within BWI76_RS13800 at 2879.566 kb on - strand at 2880.291 kb on - strand, within BWI76_RS13805 at 2880.291 kb on - strand, within BWI76_RS13805 at 2880.417 kb on + strand at 2880.422 kb on + strand at 2880.450 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB30 MOI 1 remove 2,877,808 + BWI76_RS13795 0.81 +0.2 2,877,808 + BWI76_RS13795 0.81 -0.1 2,877,816 - BWI76_RS13795 0.82 +2.1 2,877,816 - BWI76_RS13795 0.82 -0.0 2,878,274 - +1.0 2,878,320 + -3.2 2,878,322 - -0.8 2,878,326 + +0.0 2,878,419 + +0.2 2,878,514 + -0.1 2,878,537 + -1.1 2,878,670 + BWI76_RS13800 0.17 +0.8 2,878,680 + BWI76_RS13800 0.18 -0.8 2,878,925 + BWI76_RS13800 0.43 -0.6 2,878,968 + BWI76_RS13800 0.47 +0.8 2,879,023 + BWI76_RS13800 0.52 +1.5 2,879,287 - BWI76_RS13800 0.78 -0.0 2,879,342 - BWI76_RS13800 0.84 +2.0 2,879,566 - -1.2 2,880,291 - BWI76_RS13805 0.89 -0.7 2,880,291 - BWI76_RS13805 0.89 -0.3 2,880,417 + -0.2 2,880,422 + +1.6 2,880,450 + -0.6
Or see this region's nucleotide sequence