Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09130
Experiment: KLEB30 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KLEB30 MOI 1 |
---|---|---|---|---|---|
remove | |||||
1,928,477 | - | BWI76_RS09125 | 0.50 | -0.5 | |
1,928,477 | - | BWI76_RS09125 | 0.50 | +1.7 | |
1,928,477 | - | BWI76_RS09125 | 0.50 | -1.5 | |
1,928,541 | + | BWI76_RS09125 | 0.55 | +0.7 | |
1,928,541 | + | BWI76_RS09125 | 0.55 | +0.8 | |
1,928,549 | - | BWI76_RS09125 | 0.56 | +0.4 | |
1,928,549 | - | BWI76_RS09125 | 0.56 | -0.9 | |
1,928,549 | - | BWI76_RS09125 | 0.56 | +0.7 | |
1,928,591 | - | BWI76_RS09125 | 0.59 | +0.1 | |
1,928,765 | - | BWI76_RS09125 | 0.73 | -0.7 | |
1,928,799 | - | BWI76_RS09125 | 0.76 | +0.9 | |
1,928,845 | - | BWI76_RS09125 | 0.80 | -0.5 | |
1,928,948 | + | BWI76_RS09125 | 0.88 | -0.8 | |
1,928,953 | + | BWI76_RS09125 | 0.88 | +0.0 | |
1,929,039 | - | -0.5 | |||
1,929,105 | + | -0.1 | |||
1,929,126 | - | -3.2 | |||
1,929,476 | + | -0.8 | |||
1,929,495 | - | +0.5 | |||
1,929,619 | + | BWI76_RS09130 | 0.38 | -0.3 | |
1,929,740 | + | BWI76_RS09130 | 0.70 | -1.0 | |
1,929,748 | - | BWI76_RS09130 | 0.72 | -1.3 | |
1,929,929 | - | -1.1 | |||
1,930,520 | - | BWI76_RS09135 | 0.50 | +0.9 | |
1,930,603 | + | BWI76_RS09135 | 0.58 | -0.1 | |
1,930,603 | + | BWI76_RS09135 | 0.58 | +0.2 | |
1,930,611 | - | BWI76_RS09135 | 0.58 | +1.9 | |
1,930,730 | + | BWI76_RS09135 | 0.69 | -1.1 |
Or see this region's nucleotide sequence