Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08750

Experiment: KLEB30 MOI 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS08745 and BWI76_RS08750 are separated by 104 nucleotidesBWI76_RS08750 and BWI76_RS08755 are separated by 69 nucleotides BWI76_RS08745: BWI76_RS08745 - proline-specific permease, at 1,843,008 to 1,844,387 _RS08745 BWI76_RS08750: BWI76_RS08750 - kinase inhibitor, at 1,844,492 to 1,844,968 _RS08750 BWI76_RS08755: BWI76_RS08755 - adenosylmethionine--8-amino-7-oxononanoate transaminase, at 1,845,038 to 1,846,327 _RS08755 Position (kb) 1844 1845Strain fitness (log2 ratio) -1 0 1at 1843.748 kb on + strand, within BWI76_RS08745at 1844.312 kb on + strandat 1844.312 kb on + strandat 1844.867 kb on - strand, within BWI76_RS08750at 1845.273 kb on - strand, within BWI76_RS08755at 1845.557 kb on + strand, within BWI76_RS08755at 1845.732 kb on + strand, within BWI76_RS08755at 1845.852 kb on - strand, within BWI76_RS08755at 1845.936 kb on + strand, within BWI76_RS08755

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB30 MOI 1
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1,843,748 + BWI76_RS08745 0.54 +0.4
1,844,312 + -0.8
1,844,312 + -0.5
1,844,867 - BWI76_RS08750 0.79 -1.0
1,845,273 - BWI76_RS08755 0.18 -1.7
1,845,557 + BWI76_RS08755 0.40 -0.6
1,845,732 + BWI76_RS08755 0.54 +0.1
1,845,852 - BWI76_RS08755 0.63 +1.5
1,845,936 + BWI76_RS08755 0.70 -0.3

Or see this region's nucleotide sequence