Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS03585

Experiment: KLEB30 MOI 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS03580 and BWI76_RS03585 are separated by 15 nucleotidesBWI76_RS03585 and BWI76_RS03590 are separated by 26 nucleotides BWI76_RS03580: BWI76_RS03580 - iron-containing alcohol dehydrogenase, at 742,866 to 744,008 _RS03580 BWI76_RS03585: BWI76_RS03585 - ethanolamine utilization protein EutN, at 744,024 to 744,281 _RS03585 BWI76_RS03590: BWI76_RS03590 - acetaldehyde dehydrogenase (acetylating), at 744,308 to 745,909 _RS03590 Position (kb) 744 745Strain fitness (log2 ratio) -2 -1 0 1at 743.040 kb on + strand, within BWI76_RS03580at 743.073 kb on - strand, within BWI76_RS03580at 743.102 kb on - strand, within BWI76_RS03580at 743.292 kb on + strand, within BWI76_RS03580at 743.655 kb on + strand, within BWI76_RS03580at 743.685 kb on + strand, within BWI76_RS03580at 743.858 kb on + strand, within BWI76_RS03580at 744.070 kb on + strand, within BWI76_RS03585at 744.070 kb on + strand, within BWI76_RS03585at 744.070 kb on + strand, within BWI76_RS03585at 744.120 kb on + strand, within BWI76_RS03585at 744.617 kb on - strand, within BWI76_RS03590at 744.653 kb on + strand, within BWI76_RS03590at 744.653 kb on + strand, within BWI76_RS03590at 744.658 kb on + strand, within BWI76_RS03590at 744.779 kb on + strand, within BWI76_RS03590at 744.787 kb on + strand, within BWI76_RS03590at 744.937 kb on + strand, within BWI76_RS03590at 744.984 kb on - strand, within BWI76_RS03590at 745.253 kb on - strand, within BWI76_RS03590

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Per-strain Table

Position Strand Gene LocusTag Fraction KLEB30 MOI 1
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743,040 + BWI76_RS03580 0.15 +1.4
743,073 - BWI76_RS03580 0.18 -1.3
743,102 - BWI76_RS03580 0.21 -1.5
743,292 + BWI76_RS03580 0.37 -1.8
743,655 + BWI76_RS03580 0.69 -0.5
743,685 + BWI76_RS03580 0.72 -1.4
743,858 + BWI76_RS03580 0.87 -0.3
744,070 + BWI76_RS03585 0.18 +1.2
744,070 + BWI76_RS03585 0.18 -0.3
744,070 + BWI76_RS03585 0.18 +0.7
744,120 + BWI76_RS03585 0.37 -0.4
744,617 - BWI76_RS03590 0.19 -1.0
744,653 + BWI76_RS03590 0.22 -0.3
744,653 + BWI76_RS03590 0.22 -0.8
744,658 + BWI76_RS03590 0.22 +0.0
744,779 + BWI76_RS03590 0.29 -1.0
744,787 + BWI76_RS03590 0.30 +0.1
744,937 + BWI76_RS03590 0.39 +0.8
744,984 - BWI76_RS03590 0.42 -0.6
745,253 - BWI76_RS03590 0.59 -0.4

Or see this region's nucleotide sequence