Experiment: KLEB15 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01690 and BWI76_RS01695 are separated by 261 nucleotides BWI76_RS01695 and BWI76_RS01700 are separated by 243 nucleotides
BWI76_RS01690: BWI76_RS01690 - membrane protein, at 347,020 to 348,651
_RS01690
BWI76_RS01695: BWI76_RS01695 - IS110 family transposase, at 348,913 to 349,893
_RS01695
BWI76_RS01700: BWI76_RS01700 - dipeptidase E, at 350,137 to 350,826
_RS01700
Position (kb) 348
349
350 Strain fitness (log2 ratio) -1
0
1 at 347.927 kb on - strand, within BWI76_RS01690 at 347.994 kb on + strand, within BWI76_RS01690 at 347.994 kb on + strand, within BWI76_RS01690 at 348.590 kb on + strand at 348.598 kb on - strand at 348.607 kb on - strand at 348.669 kb on + strand at 348.971 kb on + strand at 349.010 kb on + strand at 349.027 kb on + strand, within BWI76_RS01695 at 349.073 kb on + strand, within BWI76_RS01695 at 349.081 kb on - strand, within BWI76_RS01695 at 349.081 kb on - strand, within BWI76_RS01695 at 349.081 kb on - strand, within BWI76_RS01695 at 349.081 kb on - strand, within BWI76_RS01695 at 349.093 kb on + strand, within BWI76_RS01695 at 349.097 kb on + strand, within BWI76_RS01695 at 349.102 kb on + strand, within BWI76_RS01695 at 349.492 kb on - strand, within BWI76_RS01695 at 349.569 kb on + strand, within BWI76_RS01695 at 349.607 kb on + strand, within BWI76_RS01695 at 349.633 kb on - strand, within BWI76_RS01695 at 349.633 kb on - strand, within BWI76_RS01695 at 349.680 kb on - strand, within BWI76_RS01695 at 349.680 kb on - strand, within BWI76_RS01695 at 349.708 kb on + strand, within BWI76_RS01695 at 349.733 kb on - strand, within BWI76_RS01695 at 349.743 kb on - strand, within BWI76_RS01695 at 349.845 kb on - strand at 349.860 kb on + strand at 350.096 kb on - strand at 350.153 kb on + strand at 350.188 kb on - strand at 350.202 kb on - strand at 350.219 kb on + strand, within BWI76_RS01700 at 350.219 kb on + strand, within BWI76_RS01700 at 350.282 kb on - strand, within BWI76_RS01700 at 350.293 kb on - strand, within BWI76_RS01700 at 350.293 kb on - strand, within BWI76_RS01700 at 350.457 kb on - strand, within BWI76_RS01700 at 350.457 kb on - strand, within BWI76_RS01700 at 350.722 kb on - strand, within BWI76_RS01700 at 350.780 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 0.1 remove 347,927 - BWI76_RS01690 0.56 +0.8 347,994 + BWI76_RS01690 0.60 +1.0 347,994 + BWI76_RS01690 0.60 +1.5 348,590 + -0.3 348,598 - +0.1 348,607 - -1.5 348,669 + +0.8 348,971 + +0.7 349,010 + -0.4 349,027 + BWI76_RS01695 0.12 +0.2 349,073 + BWI76_RS01695 0.16 -0.2 349,081 - BWI76_RS01695 0.17 +0.7 349,081 - BWI76_RS01695 0.17 -0.7 349,081 - BWI76_RS01695 0.17 -1.5 349,081 - BWI76_RS01695 0.17 -0.9 349,093 + BWI76_RS01695 0.18 -0.0 349,097 + BWI76_RS01695 0.19 -0.1 349,102 + BWI76_RS01695 0.19 -1.2 349,492 - BWI76_RS01695 0.59 -0.3 349,569 + BWI76_RS01695 0.67 -0.4 349,607 + BWI76_RS01695 0.71 +1.1 349,633 - BWI76_RS01695 0.73 -0.7 349,633 - BWI76_RS01695 0.73 -0.0 349,680 - BWI76_RS01695 0.78 +0.8 349,680 - BWI76_RS01695 0.78 -0.5 349,708 + BWI76_RS01695 0.81 -0.8 349,733 - BWI76_RS01695 0.84 +0.3 349,743 - BWI76_RS01695 0.85 -0.6 349,845 - -1.1 349,860 + +0.2 350,096 - +0.1 350,153 + +1.6 350,188 - -0.7 350,202 - +0.3 350,219 + BWI76_RS01700 0.12 -0.4 350,219 + BWI76_RS01700 0.12 -0.3 350,282 - BWI76_RS01700 0.21 -1.0 350,293 - BWI76_RS01700 0.23 -0.1 350,293 - BWI76_RS01700 0.23 -1.4 350,457 - BWI76_RS01700 0.46 -0.7 350,457 - BWI76_RS01700 0.46 -0.6 350,722 - BWI76_RS01700 0.85 +0.5 350,780 - -0.1
Or see this region's nucleotide sequence