Experiment: KLEB15 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24310 and BWI76_RS24315 are separated by 120 nucleotides BWI76_RS24315 and BWI76_RS24320 are separated by 84 nucleotides
BWI76_RS24310: BWI76_RS24310 - YgiQ family radical SAM protein, at 5,064,647 to 5,066,830
_RS24310
BWI76_RS24315: BWI76_RS24315 - cell division protein FtsP, at 5,066,951 to 5,068,363
_RS24315
BWI76_RS24320: BWI76_RS24320 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 5,068,448 to 5,069,185
_RS24320
Position (kb)
5066
5067
5068
5069 Strain fitness (log2 ratio)
-1
0
1 at 5065.954 kb on + strand, within BWI76_RS24310 at 5066.077 kb on + strand, within BWI76_RS24310 at 5066.173 kb on - strand, within BWI76_RS24310 at 5066.400 kb on - strand, within BWI76_RS24310 at 5066.405 kb on - strand, within BWI76_RS24310 at 5066.479 kb on - strand, within BWI76_RS24310 at 5066.546 kb on + strand, within BWI76_RS24310 at 5066.561 kb on - strand, within BWI76_RS24310 at 5066.924 kb on + strand at 5066.939 kb on + strand at 5066.939 kb on + strand at 5066.985 kb on - strand at 5067.060 kb on - strand at 5067.255 kb on + strand, within BWI76_RS24315 at 5067.263 kb on - strand at 5067.554 kb on - strand, within BWI76_RS24315 at 5067.656 kb on - strand, within BWI76_RS24315 at 5067.767 kb on + strand, within BWI76_RS24315 at 5067.775 kb on - strand, within BWI76_RS24315 at 5067.893 kb on - strand, within BWI76_RS24315 at 5068.058 kb on - strand, within BWI76_RS24315 at 5068.135 kb on + strand, within BWI76_RS24315 at 5068.279 kb on - strand at 5068.326 kb on - strand at 5069.213 kb on + strand at 5069.221 kb on - strand at 5069.227 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 0.1 remove 5,065,954 + BWI76_RS24310 0.60 +1.3 5,066,077 + BWI76_RS24310 0.65 -0.6 5,066,173 - BWI76_RS24310 0.70 +0.6 5,066,400 - BWI76_RS24310 0.80 -0.2 5,066,405 - BWI76_RS24310 0.80 -0.8 5,066,479 - BWI76_RS24310 0.84 -0.6 5,066,546 + BWI76_RS24310 0.87 -0.0 5,066,561 - BWI76_RS24310 0.88 +0.0 5,066,924 + +0.8 5,066,939 + -0.5 5,066,939 + -1.2 5,066,985 - +0.7 5,067,060 - -1.3 5,067,255 + BWI76_RS24315 0.22 -0.1 5,067,263 - +1.0 5,067,554 - BWI76_RS24315 0.43 -1.5 5,067,656 - BWI76_RS24315 0.50 +0.4 5,067,767 + BWI76_RS24315 0.58 -1.7 5,067,775 - BWI76_RS24315 0.58 -1.6 5,067,893 - BWI76_RS24315 0.67 -0.3 5,068,058 - BWI76_RS24315 0.78 -1.1 5,068,135 + BWI76_RS24315 0.84 -0.1 5,068,279 - -1.4 5,068,326 - -1.5 5,069,213 + -0.3 5,069,221 - +0.2 5,069,227 + -0.0
Or see this region's nucleotide sequence