Experiment: KLEB15 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18590 and BWI76_RS18595 are separated by 139 nucleotides BWI76_RS18595 and BWI76_RS18600 are separated by 14 nucleotides BWI76_RS18600 and BWI76_RS18605 overlap by 11 nucleotides BWI76_RS18605 and BWI76_RS18610 are separated by 178 nucleotides
BWI76_RS18590: BWI76_RS18590 - DNA-binding response regulator, at 3,855,903 to 3,856,571
_RS18590
BWI76_RS18595: BWI76_RS18595 - hypothetical protein, at 3,856,711 to 3,857,337
_RS18595
BWI76_RS18600: BWI76_RS18600 - HupC/HyaC/HydC family protein, at 3,857,352 to 3,857,960
_RS18600
BWI76_RS18605: BWI76_RS18605 - oxidoreductase molybdopterin-binding protein, at 3,857,950 to 3,858,717
_RS18605
BWI76_RS18610: BWI76_RS18610 - transcriptional regulator LysR, at 3,858,896 to 3,859,882
_RS18610
Position (kb)
3857
3858 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3856.412 kb on + strand, within BWI76_RS18590 at 3856.420 kb on - strand, within BWI76_RS18590 at 3856.516 kb on - strand at 3856.517 kb on - strand at 3856.608 kb on - strand at 3856.655 kb on + strand at 3856.663 kb on - strand at 3856.663 kb on - strand at 3856.778 kb on - strand, within BWI76_RS18595 at 3856.823 kb on - strand, within BWI76_RS18595 at 3857.059 kb on + strand, within BWI76_RS18595 at 3857.237 kb on - strand, within BWI76_RS18595 at 3857.384 kb on - strand at 3857.398 kb on - strand at 3857.416 kb on - strand, within BWI76_RS18600 at 3857.540 kb on + strand, within BWI76_RS18600 at 3857.572 kb on - strand, within BWI76_RS18600 at 3857.585 kb on + strand, within BWI76_RS18600 at 3857.676 kb on - strand, within BWI76_RS18600 at 3857.737 kb on - strand, within BWI76_RS18600 at 3857.795 kb on + strand, within BWI76_RS18600 at 3858.065 kb on + strand, within BWI76_RS18605 at 3858.180 kb on + strand, within BWI76_RS18605 at 3858.189 kb on - strand, within BWI76_RS18605 at 3858.685 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 0.1 remove 3,856,412 + BWI76_RS18590 0.76 -0.4 3,856,420 - BWI76_RS18590 0.77 -0.4 3,856,516 - +0.5 3,856,517 - -0.4 3,856,608 - +0.0 3,856,655 + +0.8 3,856,663 - -0.3 3,856,663 - -0.4 3,856,778 - BWI76_RS18595 0.11 +2.3 3,856,823 - BWI76_RS18595 0.18 +0.4 3,857,059 + BWI76_RS18595 0.56 +0.0 3,857,237 - BWI76_RS18595 0.84 -1.0 3,857,384 - +0.6 3,857,398 - -0.9 3,857,416 - BWI76_RS18600 0.11 -0.7 3,857,540 + BWI76_RS18600 0.31 -1.2 3,857,572 - BWI76_RS18600 0.36 -0.4 3,857,585 + BWI76_RS18600 0.38 -1.0 3,857,676 - BWI76_RS18600 0.53 +2.2 3,857,737 - BWI76_RS18600 0.63 -0.1 3,857,795 + BWI76_RS18600 0.73 -1.3 3,858,065 + BWI76_RS18605 0.15 +0.4 3,858,180 + BWI76_RS18605 0.30 -1.8 3,858,189 - BWI76_RS18605 0.31 -0.4 3,858,685 + +0.6
Or see this region's nucleotide sequence