Experiment: KLEB15 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07160 and BWI76_RS07165 are separated by 9 nucleotides BWI76_RS07165 and BWI76_RS07170 are separated by 138 nucleotides
BWI76_RS07160: BWI76_RS07160 - MBL fold hydrolase, at 1,504,661 to 1,505,488
_RS07160
BWI76_RS07165: BWI76_RS07165 - hypothetical protein, at 1,505,498 to 1,506,040
_RS07165
BWI76_RS07170: BWI76_RS07170 - LysR family transcriptional regulator, at 1,506,179 to 1,507,054
_RS07170
Position (kb)
1505
1506
1507 Strain fitness (log2 ratio)
-1
0
1 at 1504.587 kb on + strand at 1504.587 kb on + strand at 1504.633 kb on + strand at 1504.660 kb on - strand at 1504.675 kb on + strand at 1504.700 kb on + strand at 1504.712 kb on + strand at 1504.720 kb on - strand at 1504.799 kb on + strand, within BWI76_RS07160 at 1504.802 kb on - strand, within BWI76_RS07160 at 1504.802 kb on - strand, within BWI76_RS07160 at 1504.941 kb on - strand, within BWI76_RS07160 at 1505.289 kb on + strand, within BWI76_RS07160 at 1505.831 kb on - strand, within BWI76_RS07165 at 1505.861 kb on + strand, within BWI76_RS07165 at 1506.224 kb on - strand at 1506.570 kb on + strand, within BWI76_RS07170 at 1506.685 kb on + strand, within BWI76_RS07170 at 1506.786 kb on - strand at 1506.791 kb on - strand, within BWI76_RS07170 at 1506.831 kb on - strand, within BWI76_RS07170 at 1506.845 kb on - strand, within BWI76_RS07170 at 1506.866 kb on - strand, within BWI76_RS07170 at 1506.945 kb on + strand, within BWI76_RS07170 at 1507.002 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 0.1 remove 1,504,587 + +0.4 1,504,587 + -0.5 1,504,633 + -0.3 1,504,660 - +0.2 1,504,675 + -0.4 1,504,700 + -0.4 1,504,712 + +0.7 1,504,720 - -0.0 1,504,799 + BWI76_RS07160 0.17 -0.6 1,504,802 - BWI76_RS07160 0.17 +0.8 1,504,802 - BWI76_RS07160 0.17 +0.3 1,504,941 - BWI76_RS07160 0.34 -1.6 1,505,289 + BWI76_RS07160 0.76 -0.0 1,505,831 - BWI76_RS07165 0.61 -1.3 1,505,861 + BWI76_RS07165 0.67 -0.3 1,506,224 - -0.2 1,506,570 + BWI76_RS07170 0.45 -0.9 1,506,685 + BWI76_RS07170 0.58 +1.2 1,506,786 - -1.1 1,506,791 - BWI76_RS07170 0.70 -0.2 1,506,831 - BWI76_RS07170 0.74 -0.6 1,506,845 - BWI76_RS07170 0.76 +0.6 1,506,866 - BWI76_RS07170 0.78 -0.5 1,506,945 + BWI76_RS07170 0.87 -0.0 1,507,002 - -0.0
Or see this region's nucleotide sequence