Experiment: KLEB15 MOI 0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03325 and BWI76_RS03330 overlap by 2 nucleotides BWI76_RS03330 and BWI76_RS03335 are separated by 933 nucleotides
BWI76_RS03325: BWI76_RS03325 - LysR family transcriptional regulator, at 685,212 to 686,105
_RS03325
BWI76_RS03330: BWI76_RS03330 - putative hydrolase, at 686,104 to 687,396
_RS03330
BWI76_RS03335: BWI76_RS03335 - hypothetical protein, at 688,330 to 688,578
_RS03335
Position (kb) 686
687
688 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 685.161 kb on - strand at 685.170 kb on + strand at 685.178 kb on - strand at 685.187 kb on + strand at 685.222 kb on + strand at 685.225 kb on + strand at 685.225 kb on + strand at 685.232 kb on + strand at 685.233 kb on - strand at 685.233 kb on - strand at 685.243 kb on + strand at 685.243 kb on - strand at 685.249 kb on - strand at 685.289 kb on + strand at 685.305 kb on + strand, within BWI76_RS03325 at 685.305 kb on + strand, within BWI76_RS03325 at 685.305 kb on + strand, within BWI76_RS03325 at 685.313 kb on - strand, within BWI76_RS03325 at 685.320 kb on + strand at 685.336 kb on - strand, within BWI76_RS03325 at 685.354 kb on + strand, within BWI76_RS03325 at 685.363 kb on + strand, within BWI76_RS03325 at 685.371 kb on - strand, within BWI76_RS03325 at 685.371 kb on - strand, within BWI76_RS03325 at 685.373 kb on + strand, within BWI76_RS03325 at 685.420 kb on + strand, within BWI76_RS03325 at 685.430 kb on + strand, within BWI76_RS03325 at 685.430 kb on + strand, within BWI76_RS03325 at 685.438 kb on - strand, within BWI76_RS03325 at 685.465 kb on + strand, within BWI76_RS03325 at 685.472 kb on + strand, within BWI76_RS03325 at 685.481 kb on + strand, within BWI76_RS03325 at 685.488 kb on + strand, within BWI76_RS03325 at 685.489 kb on - strand, within BWI76_RS03325 at 685.489 kb on - strand, within BWI76_RS03325 at 685.586 kb on + strand, within BWI76_RS03325 at 685.690 kb on + strand, within BWI76_RS03325 at 685.952 kb on + strand, within BWI76_RS03325 at 685.952 kb on + strand, within BWI76_RS03325 at 685.952 kb on + strand, within BWI76_RS03325 at 685.960 kb on - strand, within BWI76_RS03325 at 685.960 kb on - strand, within BWI76_RS03325 at 685.960 kb on - strand, within BWI76_RS03325 at 685.960 kb on - strand, within BWI76_RS03325 at 686.116 kb on - strand at 686.118 kb on + strand at 686.118 kb on + strand at 686.118 kb on + strand at 686.126 kb on - strand at 686.147 kb on + strand at 686.175 kb on + strand at 686.248 kb on - strand, within BWI76_RS03330 at 686.248 kb on - strand, within BWI76_RS03330 at 686.268 kb on - strand, within BWI76_RS03330 at 686.335 kb on + strand, within BWI76_RS03330 at 686.343 kb on - strand, within BWI76_RS03330 at 686.343 kb on - strand, within BWI76_RS03330 at 686.378 kb on - strand, within BWI76_RS03330 at 686.397 kb on + strand, within BWI76_RS03330 at 686.543 kb on + strand, within BWI76_RS03330 at 686.589 kb on + strand, within BWI76_RS03330 at 686.589 kb on + strand, within BWI76_RS03330 at 686.613 kb on - strand, within BWI76_RS03330 at 686.615 kb on + strand, within BWI76_RS03330 at 686.615 kb on + strand, within BWI76_RS03330 at 686.615 kb on + strand, within BWI76_RS03330 at 686.623 kb on - strand, within BWI76_RS03330 at 686.623 kb on - strand, within BWI76_RS03330 at 686.623 kb on - strand, within BWI76_RS03330 at 686.634 kb on - strand, within BWI76_RS03330 at 686.685 kb on + strand, within BWI76_RS03330 at 686.708 kb on + strand, within BWI76_RS03330 at 686.708 kb on + strand, within BWI76_RS03330 at 686.716 kb on - strand, within BWI76_RS03330 at 686.716 kb on - strand, within BWI76_RS03330 at 686.731 kb on + strand, within BWI76_RS03330 at 686.827 kb on - strand, within BWI76_RS03330 at 686.851 kb on + strand, within BWI76_RS03330 at 686.861 kb on + strand, within BWI76_RS03330 at 686.869 kb on - strand, within BWI76_RS03330 at 686.869 kb on - strand, within BWI76_RS03330 at 686.923 kb on - strand, within BWI76_RS03330 at 686.928 kb on - strand, within BWI76_RS03330 at 686.963 kb on + strand, within BWI76_RS03330 at 686.963 kb on + strand, within BWI76_RS03330 at 686.963 kb on + strand, within BWI76_RS03330 at 686.966 kb on + strand, within BWI76_RS03330 at 686.971 kb on - strand, within BWI76_RS03330 at 687.022 kb on + strand, within BWI76_RS03330 at 687.038 kb on - strand, within BWI76_RS03330 at 687.258 kb on + strand, within BWI76_RS03330 at 687.266 kb on - strand, within BWI76_RS03330 at 687.274 kb on + strand at 687.294 kb on + strand at 687.294 kb on + strand at 687.294 kb on + strand at 687.294 kb on + strand at 687.294 kb on + strand at 687.294 kb on + strand at 687.294 kb on + strand at 687.302 kb on - strand at 687.302 kb on - strand at 687.302 kb on - strand at 687.302 kb on - strand at 687.302 kb on - strand at 687.302 kb on - strand at 687.302 kb on - strand at 687.302 kb on - strand at 687.302 kb on - strand at 687.302 kb on - strand at 687.302 kb on - strand at 687.302 kb on - strand at 687.302 kb on - strand at 687.302 kb on - strand at 687.304 kb on + strand at 687.304 kb on - strand at 687.417 kb on - strand at 687.434 kb on - strand at 687.437 kb on + strand at 687.440 kb on + strand at 687.448 kb on - strand at 687.506 kb on + strand at 687.519 kb on + strand at 687.632 kb on - strand at 687.691 kb on - strand at 687.693 kb on + strand at 687.693 kb on + strand at 687.693 kb on + strand at 687.693 kb on + strand at 687.693 kb on + strand at 687.693 kb on + strand at 687.701 kb on - strand at 687.701 kb on - strand at 687.701 kb on - strand at 687.701 kb on - strand at 687.701 kb on - strand at 687.701 kb on - strand at 687.701 kb on - strand at 687.701 kb on - strand at 687.719 kb on + strand at 687.719 kb on + strand at 687.727 kb on - strand at 687.727 kb on - strand at 687.748 kb on - strand at 687.751 kb on + strand at 687.751 kb on + strand at 687.759 kb on - strand at 687.759 kb on - strand at 687.759 kb on - strand at 687.774 kb on + strand at 687.774 kb on + strand at 687.774 kb on + strand at 687.774 kb on + strand at 687.774 kb on + strand at 687.774 kb on + strand at 687.774 kb on + strand at 687.781 kb on + strand at 687.782 kb on - strand at 687.782 kb on - strand at 687.782 kb on - strand at 687.782 kb on - strand at 687.782 kb on - strand at 687.789 kb on - strand at 687.789 kb on - strand at 687.789 kb on - strand at 687.794 kb on + strand at 687.798 kb on + strand at 687.798 kb on + strand at 687.798 kb on + strand at 687.804 kb on + strand at 687.806 kb on - strand at 687.806 kb on - strand at 687.887 kb on + strand at 687.888 kb on + strand at 687.888 kb on + strand at 687.897 kb on + strand at 687.948 kb on - strand at 687.981 kb on - strand at 688.001 kb on + strand at 688.009 kb on - strand at 688.037 kb on - strand at 688.051 kb on - strand at 688.127 kb on + strand at 688.146 kb on + strand at 688.146 kb on + strand at 688.146 kb on + strand at 688.146 kb on + strand at 688.146 kb on + strand at 688.146 kb on + strand at 688.148 kb on - strand at 688.154 kb on - strand at 688.154 kb on - strand at 688.154 kb on - strand at 688.162 kb on + strand at 688.170 kb on - strand at 688.170 kb on - strand at 688.170 kb on - strand at 688.201 kb on + strand at 688.201 kb on + strand at 688.201 kb on + strand at 688.201 kb on + strand at 688.209 kb on - strand at 688.209 kb on - strand at 688.209 kb on - strand at 688.209 kb on - strand at 688.211 kb on + strand at 688.211 kb on + strand at 688.211 kb on + strand at 688.211 kb on + strand at 688.211 kb on + strand at 688.211 kb on + strand at 688.219 kb on - strand at 688.238 kb on - strand at 688.257 kb on + strand at 688.267 kb on + strand at 688.267 kb on + strand at 688.275 kb on - strand at 688.275 kb on - strand at 688.275 kb on - strand at 688.284 kb on + strand at 688.285 kb on - strand at 688.297 kb on + strand at 688.297 kb on + strand at 688.297 kb on + strand at 688.297 kb on + strand at 688.297 kb on + strand at 688.297 kb on + strand at 688.300 kb on - strand at 688.300 kb on - strand at 688.305 kb on - strand at 688.305 kb on - strand at 688.314 kb on + strand at 688.315 kb on - strand at 688.322 kb on + strand at 688.324 kb on + strand at 688.324 kb on + strand at 688.330 kb on - strand at 688.370 kb on + strand, within BWI76_RS03335 at 688.373 kb on - strand, within BWI76_RS03335 at 688.373 kb on - strand, within BWI76_RS03335 at 688.378 kb on - strand, within BWI76_RS03335
Per-strain Table
Position Strand Gene LocusTag Fraction KLEB15 MOI 0.1 remove 685,161 - +0.2 685,170 + -1.3 685,178 - -1.0 685,187 + -1.7 685,222 + -0.1 685,225 + -0.2 685,225 + -0.5 685,232 + +0.1 685,233 - -0.0 685,233 - +0.3 685,243 + -1.2 685,243 - -0.5 685,249 - +1.0 685,289 + -0.5 685,305 + BWI76_RS03325 0.10 -0.2 685,305 + BWI76_RS03325 0.10 +0.1 685,305 + BWI76_RS03325 0.10 +0.0 685,313 - BWI76_RS03325 0.11 -0.2 685,320 + +0.6 685,336 - BWI76_RS03325 0.14 -0.4 685,354 + BWI76_RS03325 0.16 -0.7 685,363 + BWI76_RS03325 0.17 -0.5 685,371 - BWI76_RS03325 0.18 -1.1 685,371 - BWI76_RS03325 0.18 -0.5 685,373 + BWI76_RS03325 0.18 -0.3 685,420 + BWI76_RS03325 0.23 -0.7 685,430 + BWI76_RS03325 0.24 +1.1 685,430 + BWI76_RS03325 0.24 -0.4 685,438 - BWI76_RS03325 0.25 -0.7 685,465 + BWI76_RS03325 0.28 -2.3 685,472 + BWI76_RS03325 0.29 -0.3 685,481 + BWI76_RS03325 0.30 +0.6 685,488 + BWI76_RS03325 0.31 -0.4 685,489 - BWI76_RS03325 0.31 -1.0 685,489 - BWI76_RS03325 0.31 -0.6 685,586 + BWI76_RS03325 0.42 +0.2 685,690 + BWI76_RS03325 0.53 -0.8 685,952 + BWI76_RS03325 0.83 -0.7 685,952 + BWI76_RS03325 0.83 -0.8 685,952 + BWI76_RS03325 0.83 -2.6 685,960 - BWI76_RS03325 0.84 -1.9 685,960 - BWI76_RS03325 0.84 -0.5 685,960 - BWI76_RS03325 0.84 +0.4 685,960 - BWI76_RS03325 0.84 -2.7 686,116 - +0.0 686,118 + +1.1 686,118 + +2.1 686,118 + -1.9 686,126 - -0.1 686,147 + -1.3 686,175 + -0.4 686,248 - BWI76_RS03330 0.11 -0.7 686,248 - BWI76_RS03330 0.11 -0.4 686,268 - BWI76_RS03330 0.13 +0.0 686,335 + BWI76_RS03330 0.18 -0.3 686,343 - BWI76_RS03330 0.18 -1.0 686,343 - BWI76_RS03330 0.18 -0.6 686,378 - BWI76_RS03330 0.21 +1.3 686,397 + BWI76_RS03330 0.23 -0.9 686,543 + BWI76_RS03330 0.34 -1.5 686,589 + BWI76_RS03330 0.38 +0.1 686,589 + BWI76_RS03330 0.38 -0.1 686,613 - BWI76_RS03330 0.39 -0.2 686,615 + BWI76_RS03330 0.40 -1.1 686,615 + BWI76_RS03330 0.40 -0.7 686,615 + BWI76_RS03330 0.40 +0.1 686,623 - BWI76_RS03330 0.40 -0.9 686,623 - BWI76_RS03330 0.40 -3.1 686,623 - BWI76_RS03330 0.40 -0.5 686,634 - BWI76_RS03330 0.41 +0.5 686,685 + BWI76_RS03330 0.45 -0.3 686,708 + BWI76_RS03330 0.47 -0.3 686,708 + BWI76_RS03330 0.47 -2.3 686,716 - BWI76_RS03330 0.47 -0.8 686,716 - BWI76_RS03330 0.47 -0.7 686,731 + BWI76_RS03330 0.48 -0.3 686,827 - BWI76_RS03330 0.56 -0.4 686,851 + BWI76_RS03330 0.58 +0.3 686,861 + BWI76_RS03330 0.59 -0.1 686,869 - BWI76_RS03330 0.59 +0.2 686,869 - BWI76_RS03330 0.59 +1.0 686,923 - BWI76_RS03330 0.63 +0.5 686,928 - BWI76_RS03330 0.64 +0.5 686,963 + BWI76_RS03330 0.66 +0.1 686,963 + BWI76_RS03330 0.66 -0.9 686,963 + BWI76_RS03330 0.66 -0.9 686,966 + BWI76_RS03330 0.67 +0.3 686,971 - BWI76_RS03330 0.67 -0.2 687,022 + BWI76_RS03330 0.71 -0.5 687,038 - BWI76_RS03330 0.72 -0.1 687,258 + BWI76_RS03330 0.89 -0.7 687,266 - BWI76_RS03330 0.90 +0.4 687,274 + +0.1 687,294 + +0.3 687,294 + -0.9 687,294 + -0.6 687,294 + +0.5 687,294 + -1.1 687,294 + +1.9 687,294 + -0.5 687,302 - +0.5 687,302 - -0.7 687,302 - -0.5 687,302 - +0.3 687,302 - -0.2 687,302 - +0.7 687,302 - -0.3 687,302 - -0.7 687,302 - -0.0 687,302 - -0.5 687,302 - -0.3 687,302 - -2.5 687,302 - -0.6 687,302 - -1.2 687,304 + -0.5 687,304 - +0.7 687,417 - -0.1 687,434 - +0.5 687,437 + -0.5 687,440 + -1.0 687,448 - -1.4 687,506 + -1.1 687,519 + +0.0 687,632 - -3.3 687,691 - -0.9 687,693 + -0.0 687,693 + -1.1 687,693 + -1.2 687,693 + +0.2 687,693 + -2.5 687,693 + +0.1 687,701 - -0.7 687,701 - -0.2 687,701 - +0.7 687,701 - -1.5 687,701 - -0.8 687,701 - -0.1 687,701 - +0.5 687,701 - +0.3 687,719 + -0.1 687,719 + +0.1 687,727 - +0.6 687,727 - +0.9 687,748 - +0.1 687,751 + -1.0 687,751 + -1.6 687,759 - -0.6 687,759 - -0.8 687,759 - -0.4 687,774 + -0.2 687,774 + -1.8 687,774 + +1.7 687,774 + +0.1 687,774 + -0.7 687,774 + +1.7 687,774 + -2.7 687,781 + +0.5 687,782 - -1.7 687,782 - +0.5 687,782 - +0.1 687,782 - -0.9 687,782 - -1.2 687,789 - -1.1 687,789 - +0.7 687,789 - -0.4 687,794 + +1.1 687,798 + -0.8 687,798 + +0.2 687,798 + -1.2 687,804 + -0.8 687,806 - -1.0 687,806 - -1.0 687,887 + -0.2 687,888 + -0.1 687,888 + -0.7 687,897 + -0.9 687,948 - +1.7 687,981 - -0.9 688,001 + -1.8 688,009 - +0.3 688,037 - -0.2 688,051 - -2.3 688,127 + -0.4 688,146 + -0.3 688,146 + -1.0 688,146 + -3.3 688,146 + -0.5 688,146 + +0.3 688,146 + -0.9 688,148 - -1.7 688,154 - +0.7 688,154 - +2.1 688,154 - -1.7 688,162 + +0.3 688,170 - -1.1 688,170 - +0.4 688,170 - -0.7 688,201 + -0.9 688,201 + -0.1 688,201 + -1.0 688,201 + +1.2 688,209 - -0.5 688,209 - -0.4 688,209 - -0.9 688,209 - +0.1 688,211 + -0.2 688,211 + +2.3 688,211 + -0.6 688,211 + -0.8 688,211 + -0.5 688,211 + -3.6 688,219 - +0.1 688,238 - -0.2 688,257 + -1.1 688,267 + +0.0 688,267 + +0.7 688,275 - -1.0 688,275 - -0.3 688,275 - -1.7 688,284 + -1.3 688,285 - -1.3 688,297 + +0.1 688,297 + -0.3 688,297 + -0.7 688,297 + +0.7 688,297 + -0.7 688,297 + -0.2 688,300 - +1.0 688,300 - -0.4 688,305 - +0.5 688,305 - +0.4 688,314 + +0.3 688,315 - +1.3 688,322 + +0.1 688,324 + +0.3 688,324 + -1.0 688,330 - -0.0 688,370 + BWI76_RS03335 0.16 +3.3 688,373 - BWI76_RS03335 0.17 -0.4 688,373 - BWI76_RS03335 0.17 -1.0 688,378 - BWI76_RS03335 0.19 -1.1
Or see this region's nucleotide sequence