Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4539

Experiment: B-glucan from yeast; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	B-glucan from yeast; autoclaved 2.5 mg/ml (C)
5,958,670	-		BT4538	0.39	+1.7
5,958,672	-		BT4538	0.40	-1.6
5,958,697	+		BT4538	0.41	-2.8
5,958,697	+		BT4538	0.41	+2.0
5,958,742	-		BT4538	0.44	-0.8
5,958,742	-		BT4538	0.44	-0.8
5,958,772	+		BT4538	0.46	+0.2
5,958,788	+		BT4538	0.47	-0.0
5,958,789	-		BT4538	0.47	+1.0
5,958,837	+		BT4538	0.50	+0.4
5,958,840	-		BT4538	0.50	-2.3
5,958,857	+		BT4538	0.51	-0.0
5,958,909	-		BT4538	0.55	+0.1
5,959,046	+		BT4538	0.64	+0.3
5,959,047	-		BT4538	0.64	+1.6
5,959,047	-		BT4538	0.64	+0.7
5,959,047	-		BT4538	0.64	-0.6
5,959,060	-		BT4538	0.65	+2.0
5,959,083	+		BT4538	0.66	+0.5
5,959,132	+		BT4538	0.69	+1.1
5,959,191	+		BT4538	0.73	-2.0
5,959,213	+		BT4538	0.74	-0.9
5,959,254	-		BT4538	0.77	+0.3
5,959,292	+		BT4538	0.79	+0.2
5,959,362	-		BT4538	0.84	+1.0
5,959,410	+		BT4538	0.87	-0.2
5,959,411	-		BT4538	0.87	-1.9
5,959,473	+				+1.0
5,959,481	+				+1.5
5,959,502	+				-0.3
5,959,508	+				+1.2
5,959,582	-				+0.0
5,959,603	+				-1.5
5,959,608	+				-0.0
5,959,648	+				-0.6
5,959,649	-				-0.6
5,959,677	-				-1.3
5,959,707	+				-0.0
5,959,708	-				-0.0
5,959,774	+				-0.0
5,959,844	+		BT4539	0.14	-1.0
5,959,983	-		BT4539	0.24	-0.3
5,960,037	-		BT4539	0.27	+0.5
5,960,277	-		BT4539	0.45	+0.6
5,960,282	-		BT4539	0.45	+0.2
5,960,282	-		BT4539	0.45	-0.5
5,960,300	-		BT4539	0.46	+1.1
5,960,307	+		BT4539	0.47	-0.0
5,960,358	-		BT4539	0.51	-0.9
5,960,364	-		BT4539	0.51	-0.2
5,960,421	+		BT4539	0.55	-0.8
5,960,455	+		BT4539	0.58	+0.4
5,960,510	+		BT4539	0.61	-1.0
5,960,520	+		BT4539	0.62	-2.0
5,960,643	+		BT4539	0.71	+0.6
5,960,643	+		BT4539	0.71	+1.6
5,960,643	+		BT4539	0.71	-0.0
5,960,644	-		BT4539	0.71	+1.1
5,960,644	-		BT4539	0.71	-0.6
5,960,655	-		BT4539	0.72	-1.3
5,960,802	-		BT4539	0.83	+1.3
5,960,805	-		BT4539	0.83	-0.0
5,960,814	-		BT4539	0.83	-0.5
5,960,814	-		BT4539	0.83	-0.0
5,960,844	+		BT4539	0.86	-1.6
5,960,912	+				+2.0
5,960,919	+				-1.0
5,960,955	-				-0.3
5,960,955	-				-1.0
5,960,961	+				-0.0
5,960,961	+				-1.6
5,960,962	-				-0.0
5,960,966	-				+1.3
5,960,993	+				-0.0
5,961,061	+				+0.1
5,961,064	+				-0.2
5,961,064	+				-1.4
5,961,070	+				+1.6
5,961,071	-				-0.6
5,961,071	-				+0.3
5,961,161	-				-1.0
5,961,217	-		BT4540	0.13	+1.6
5,961,288	+		BT4540	0.18	+0.6
5,961,288	+		BT4540	0.18	+0.6
5,961,290	-		BT4540	0.19	+1.0
5,961,327	-		BT4540	0.22	+0.7
5,961,331	-		BT4540	0.22	-0.2
5,961,352	+		BT4540	0.23	+0.0
5,961,352	+		BT4540	0.23	-0.0
5,961,353	-		BT4540	0.24	-0.1
5,961,366	+		BT4540	0.25	+0.2
5,961,366	+		BT4540	0.25	+0.1
5,961,396	+		BT4540	0.27	+2.3
5,961,406	-		BT4540	0.28	+0.9
5,961,442	+		BT4540	0.30	-0.0
5,961,443	-		BT4540	0.31	-0.0
5,961,503	+		BT4540	0.35	+0.8
5,961,503	-		BT4540	0.35	+0.6
5,961,518	+		BT4540	0.36	+1.9
5,961,721	-		BT4540	0.52	-0.0
5,961,753	+		BT4540	0.55	-0.0
5,961,786	+		BT4540	0.57	-1.3
5,961,790	-		BT4540	0.57	-1.6
5,961,832	-		BT4540	0.61	-1.6
5,961,833	+		BT4540	0.61	-0.0
5,961,833	+		BT4540	0.61	-2.5
5,961,869	-		BT4540	0.64	-1.6
5,961,919	+		BT4540	0.68	-1.1
5,961,931	-		BT4540	0.68	+1.3
5,961,949	+		BT4540	0.70	-1.4
5,961,950	-		BT4540	0.70	-0.5
5,961,953	+		BT4540	0.70	-3.3
5,961,954	-		BT4540	0.70	-2.0
5,962,024	+		BT4540	0.76	-0.0
5,962,025	-		BT4540	0.76	-1.0
5,962,026	+		BT4540	0.76	-1.0
5,962,035	+		BT4540	0.77	-2.6