Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4136

Experiment: B-glucan from yeast; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	B-glucan from yeast; autoclaved 2.5 mg/ml (C)
5,426,025	+		BT4135	0.79	-0.6
5,426,026	-		BT4135	0.79	-1.6
5,426,069	+		BT4135	0.81	-1.0
5,426,071	+		BT4135	0.81	-2.8
5,426,071	+		BT4135	0.81	-1.6
5,426,072	-		BT4135	0.81	-1.6
5,426,126	+		BT4135	0.82	-0.6
5,426,162	-		BT4135	0.84	-1.3
5,426,221	-		BT4135	0.85	-1.5
5,426,297	-		BT4135	0.88	-2.3
5,426,315	+		BT4135	0.88	-1.0
5,426,316	-		BT4135	0.88	+0.0
5,426,348	+		BT4135	0.90	+0.0
5,426,349	-		BT4135	0.90	-1.1
5,426,351	+		BT4135	0.90	+0.0
5,426,351	+		BT4135	0.90	-1.0
5,426,373	-				-1.9
5,426,396	-				-2.0
5,426,461	-				-1.6
5,426,485	+				-2.0
5,426,498	+				-1.0
5,426,504	-				-1.0
5,426,554	-				-2.1
5,426,573	-				-2.0
5,426,573	-				+0.0
5,426,573	-				+0.0
5,426,600	-				+0.0
5,426,600	-				-2.6
5,426,677	+				-0.8
5,426,682	+				-1.6
5,426,682	+				+0.0
5,426,682	+				-1.0
5,426,683	-				-0.8
5,426,702	+				-1.7
5,426,708	+				+1.0
5,426,709	-				+0.7
5,426,810	+				-1.1
5,426,843	+				-2.1
5,426,845	+				+1.0
5,426,846	-				-2.4
5,426,847	+				+0.6
5,426,929	+				-1.0
5,426,930	-				+0.0
5,426,931	+				-0.3
5,426,931	+				-1.0
5,426,989	+				-0.8
5,427,018	+				+0.3
5,427,059	+				+1.8
5,427,147	-				-2.0
5,427,170	+				-1.3
5,427,262	+		BT4136	0.14	-1.0
5,427,300	+		BT4136	0.16	+1.5
5,427,383	+		BT4136	0.21	-0.6
5,427,383	+		BT4136	0.21	+0.4
5,427,448	-		BT4136	0.24	-1.0
5,427,471	-		BT4136	0.25	-1.0
5,427,501	+		BT4136	0.27	+0.0
5,427,502	-		BT4136	0.27	-0.3
5,427,516	-		BT4136	0.28	-2.5
5,427,537	-		BT4136	0.29	+1.8
5,427,537	-		BT4136	0.29	-2.3
5,427,553	-		BT4136	0.30	-1.6
5,427,588	-		BT4136	0.32	-1.7
5,427,602	+		BT4136	0.33	-1.4
5,427,603	-		BT4136	0.33	-0.3
5,427,607	-		BT4136	0.33	+0.0
5,427,607	-		BT4136	0.33	-0.3
5,427,611	+		BT4136	0.33	+1.0
5,427,612	-		BT4136	0.33	-1.1
5,427,639	+		BT4136	0.35	+0.0
5,427,670	+		BT4136	0.36	-1.7
5,427,691	+		BT4136	0.38	-1.0
5,427,692	-		BT4136	0.38	+1.0
5,427,762	+		BT4136	0.41	+0.0
5,427,762	+		BT4136	0.41	+0.6
5,427,762	+		BT4136	0.41	-0.9
5,427,783	+		BT4136	0.43	+2.0
5,427,784	-		BT4136	0.43	-1.0
5,427,786	-		BT4136	0.43	+0.6
5,427,861	-		BT4136	0.47	-0.6
5,427,909	+		BT4136	0.50	+0.0
5,428,001	+		BT4136	0.55	-2.3
5,428,024	+		BT4136	0.56	+1.2
5,428,024	+		BT4136	0.56	-0.8
5,428,025	-		BT4136	0.56	-1.5
5,428,025	-		BT4136	0.56	+1.0
5,428,026	+		BT4136	0.56	-2.0
5,428,027	-		BT4136	0.56	-3.0
5,428,148	+		BT4136	0.63	-3.5
5,428,176	+		BT4136	0.64	-1.4
5,428,248	-		BT4136	0.68	-1.0
5,428,286	+		BT4136	0.70	+1.0
5,428,339	+		BT4136	0.73	-1.0
5,428,339	+		BT4136	0.73	-1.0
5,428,339	+		BT4136	0.73	-1.4
5,428,340	-		BT4136	0.73	+0.6
5,428,445	+		BT4136	0.79	-1.0
5,428,445	+		BT4136	0.79	-2.0
5,428,659	+				+1.0
5,428,660	-				+0.0
5,428,797	+				-1.0
5,428,800	+				-3.0
5,428,800	+				-2.6
5,428,803	-				+0.0
5,428,898	+				-0.5
5,428,938	-				-0.3
5,428,996	-				+0.0
5,429,013	-				-1.0
5,429,017	-				-2.8
5,429,017	-				-0.6
5,429,021	+				-2.0
5,429,021	+				-1.0
5,429,027	-				-0.4
5,429,151	-				+0.6
5,429,172	+				-1.8
5,429,172	+				-0.8
5,429,219	+				+0.0
5,429,220	-				+0.0
5,429,220	-				-0.5
5,429,220	-				-1.6
5,429,287	+				-0.4
5,429,322	-				-1.6
5,429,341	+				-1.4
5,429,357	+				-2.3
5,429,362	+				-1.6
5,429,362	+				+0.0
5,429,400	+				-0.3
5,429,403	+				-1.6
5,429,435	-				+0.0
5,429,446	+				-2.0
5,429,544	-				+0.0
5,429,544	-				-1.0
5,429,623	+				-1.0
5,429,623	+				-2.0
5,429,653	-				-2.6
5,429,709	+				-1.8
5,429,763	+		BT4137	0.11	-1.0
5,429,764	-		BT4137	0.11	-1.0
5,429,770	-		BT4137	0.11	-1.9
5,429,771	+		BT4137	0.11	-1.0
5,429,772	-		BT4137	0.11	-1.0
5,429,772	-		BT4137	0.11	-3.3
5,429,772	-		BT4137	0.11	-2.0
5,429,778	-		BT4137	0.12	+0.0