Experiment: B-glucan from yeast; autoclaved 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0771 and BT0772 are separated by 61 nucleotides BT0772 and BT0773 are separated by 195 nucleotides BT0773 and BT0774 are separated by 51 nucleotides BT0774 and BT0775 are separated by 128 nucleotides
BT0771: BT0771 - 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file), at 960,466 to 962,478
BT0771
BT0772: BT0772 - hypothetical protein (NCBI ptt file), at 962,540 to 963,016
BT0772
BT0773: BT0773 - alpha-amylase 3 (NCBI ptt file), at 963,212 to 964,909
BT0773
BT0774: BT0774 - conserved protein with a conserved patatin-like phospholipase domain (NCBI ptt file), at 964,961 to 965,767
BT0774
BT0775: BT0775 - ferredoxin-type protein (NCBI ptt file), at 965,896 to 967,461
BT0775
Position (kb) 963
964
965 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 962.277 kb on - strand at 962.282 kb on - strand at 962.403 kb on + strand at 962.518 kb on + strand at 962.519 kb on - strand at 962.541 kb on + strand at 962.572 kb on - strand at 962.572 kb on - strand at 962.572 kb on - strand at 962.575 kb on + strand at 962.576 kb on - strand at 962.642 kb on + strand, within BT0772 at 962.754 kb on + strand, within BT0772 at 962.754 kb on + strand, within BT0772 at 962.754 kb on + strand, within BT0772 at 962.757 kb on - strand, within BT0772 at 962.854 kb on + strand, within BT0772 at 962.898 kb on - strand, within BT0772 at 962.973 kb on + strand at 962.981 kb on + strand at 962.982 kb on - strand at 962.985 kb on - strand at 962.987 kb on + strand at 963.089 kb on + strand at 963.090 kb on - strand at 963.170 kb on + strand at 963.176 kb on - strand at 963.243 kb on + strand at 963.273 kb on + strand at 963.273 kb on + strand at 963.282 kb on - strand at 963.320 kb on - strand at 963.345 kb on - strand at 963.375 kb on - strand at 963.467 kb on - strand, within BT0773 at 963.519 kb on - strand, within BT0773 at 963.547 kb on + strand, within BT0773 at 963.547 kb on + strand, within BT0773 at 963.557 kb on - strand, within BT0773 at 963.571 kb on - strand, within BT0773 at 963.664 kb on - strand, within BT0773 at 963.677 kb on - strand, within BT0773 at 963.974 kb on - strand, within BT0773 at 963.978 kb on + strand, within BT0773 at 964.008 kb on + strand, within BT0773 at 964.391 kb on + strand, within BT0773 at 964.393 kb on + strand, within BT0773 at 964.406 kb on - strand, within BT0773 at 964.406 kb on - strand, within BT0773 at 964.410 kb on + strand, within BT0773 at 964.425 kb on + strand, within BT0773 at 964.426 kb on - strand, within BT0773 at 964.496 kb on + strand, within BT0773 at 964.497 kb on - strand, within BT0773 at 964.611 kb on - strand, within BT0773 at 964.620 kb on + strand, within BT0773 at 964.732 kb on + strand, within BT0773 at 964.732 kb on + strand, within BT0773 at 964.742 kb on - strand at 964.802 kb on - strand at 964.833 kb on + strand at 964.833 kb on + strand at 964.882 kb on - strand at 964.882 kb on - strand at 964.917 kb on - strand at 965.020 kb on + strand at 965.022 kb on + strand at 965.077 kb on - strand, within BT0774 at 965.210 kb on + strand, within BT0774 at 965.387 kb on - strand, within BT0774 at 965.557 kb on - strand, within BT0774 at 965.632 kb on + strand, within BT0774 at 965.648 kb on - strand, within BT0774 at 965.699 kb on - strand at 965.719 kb on - strand at 965.724 kb on - strand at 965.735 kb on - strand at 965.801 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction B-glucan from yeast; autoclaved 2.5 mg/ml (C) remove 962,277 - -2.6 962,282 - -2.6 962,403 + +0.0 962,518 + -2.6 962,519 - -2.0 962,541 + +1.6 962,572 - -0.7 962,572 - +0.0 962,572 - +0.8 962,575 + -0.5 962,576 - -2.0 962,642 + BT0772 0.21 -1.0 962,754 + BT0772 0.45 -2.6 962,754 + BT0772 0.45 -1.9 962,754 + BT0772 0.45 +0.0 962,757 - BT0772 0.45 +0.5 962,854 + BT0772 0.66 -1.6 962,898 - BT0772 0.75 -4.0 962,973 + -2.0 962,981 + +0.0 962,982 - -1.0 962,985 - -1.6 962,987 + -2.7 963,089 + -0.4 963,090 - +2.0 963,170 + +0.0 963,176 - +0.0 963,243 + -1.6 963,273 + +0.0 963,273 + -3.6 963,282 - +0.0 963,320 - +0.0 963,345 - -1.0 963,375 - -1.6 963,467 - BT0773 0.15 -2.3 963,519 - BT0773 0.18 -2.1 963,547 + BT0773 0.20 -2.6 963,547 + BT0773 0.20 +0.0 963,557 - BT0773 0.20 -1.6 963,571 - BT0773 0.21 -3.0 963,664 - BT0773 0.27 -2.3 963,677 - BT0773 0.27 -1.0 963,974 - BT0773 0.45 -1.0 963,978 + BT0773 0.45 -1.6 964,008 + BT0773 0.47 -2.0 964,391 + BT0773 0.69 -1.0 964,393 + BT0773 0.70 -2.0 964,406 - BT0773 0.70 +0.0 964,406 - BT0773 0.70 -1.6 964,410 + BT0773 0.71 -1.8 964,425 + BT0773 0.71 -2.2 964,426 - BT0773 0.71 +0.0 964,496 + BT0773 0.76 +1.0 964,497 - BT0773 0.76 -1.8 964,611 - BT0773 0.82 +0.0 964,620 + BT0773 0.83 -2.8 964,732 + BT0773 0.90 -3.1 964,732 + BT0773 0.90 +0.0 964,742 - -3.0 964,802 - -2.0 964,833 + -1.4 964,833 + -1.6 964,882 - -1.0 964,882 - -1.5 964,917 - -2.0 965,020 + +0.0 965,022 + -1.6 965,077 - BT0774 0.14 +0.0 965,210 + BT0774 0.31 -0.2 965,387 - BT0774 0.53 -3.0 965,557 - BT0774 0.74 -2.0 965,632 + BT0774 0.83 -2.6 965,648 - BT0774 0.85 +2.3 965,699 - -1.6 965,719 - -3.3 965,724 - -2.0 965,735 - -0.6 965,801 + +0.0
Or see this region's nucleotide sequence