Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14435

Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBPHYT_RS14430 and BPHYT_RS14435 are separated by 111 nucleotidesBPHYT_RS14435 and BPHYT_RS14440 overlap by 1 nucleotides BPHYT_RS14430: BPHYT_RS14430 - malonyl CoA-ACP transacylase, at 3,291,465 to 3,292,400 _RS14430 BPHYT_RS14435: BPHYT_RS14435 - 3-oxoacyl-ACP synthase, at 3,292,512 to 3,293,501 _RS14435 BPHYT_RS14440: BPHYT_RS14440 - phosphate acyltransferase, at 3,293,501 to 3,294,607 _RS14440 Position (kb) 3292 3293 3294Strain fitness (log2 ratio) -1 0 1at 3292.421 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days
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3,292,421 - +0.4

Or see this region's nucleotide sequence