Experiment: L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0659 and BT0660 are separated by 188 nucleotides BT0660 and BT0661 are separated by 758 nucleotides
BT0659: BT0659 - hypothetical protein (NCBI ptt file), at 811,729 to 812,766
BT0659
BT0660: BT0660 - conserved hypothetical protein (NCBI ptt file), at 812,955 to 814,106
BT0660
BT0661: BT0661 - hypothetical protein (NCBI ptt file), at 814,865 to 816,091
BT0661
Position (kb) 812
813
814
815 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 811.956 kb on + strand, within BT0659 at 812.015 kb on + strand, within BT0659 at 812.016 kb on - strand, within BT0659 at 812.052 kb on - strand, within BT0659 at 812.097 kb on + strand, within BT0659 at 812.116 kb on + strand at 812.252 kb on - strand, within BT0659 at 812.253 kb on + strand, within BT0659 at 812.253 kb on + strand, within BT0659 at 812.277 kb on + strand, within BT0659 at 812.365 kb on + strand, within BT0659 at 812.411 kb on - strand, within BT0659 at 812.412 kb on + strand, within BT0659 at 812.562 kb on - strand, within BT0659 at 812.563 kb on + strand, within BT0659 at 812.597 kb on - strand, within BT0659 at 812.597 kb on - strand, within BT0659 at 812.602 kb on - strand, within BT0659 at 812.791 kb on + strand at 812.792 kb on - strand at 812.803 kb on + strand at 812.843 kb on + strand at 813.197 kb on + strand, within BT0660 at 813.222 kb on - strand, within BT0660 at 813.230 kb on - strand, within BT0660 at 813.230 kb on - strand, within BT0660 at 813.242 kb on + strand, within BT0660 at 813.246 kb on + strand, within BT0660 at 813.272 kb on + strand, within BT0660 at 813.273 kb on - strand, within BT0660 at 813.336 kb on - strand, within BT0660 at 813.427 kb on + strand, within BT0660 at 813.428 kb on - strand, within BT0660 at 813.475 kb on + strand, within BT0660 at 813.516 kb on - strand, within BT0660 at 813.545 kb on + strand, within BT0660 at 813.556 kb on - strand, within BT0660 at 813.579 kb on + strand, within BT0660 at 813.641 kb on + strand, within BT0660 at 813.642 kb on - strand, within BT0660 at 813.810 kb on - strand, within BT0660 at 814.507 kb on - strand at 814.645 kb on + strand at 814.646 kb on - strand at 814.763 kb on - strand at 814.879 kb on + strand at 814.902 kb on + strand at 815.043 kb on + strand, within BT0661 at 815.043 kb on + strand, within BT0661 at 815.044 kb on - strand, within BT0661
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen remove 811,956 + BT0659 0.22 -3.8 812,015 + BT0659 0.28 +0.0 812,016 - BT0659 0.28 -2.7 812,052 - BT0659 0.31 -3.2 812,097 + BT0659 0.35 +1.3 812,116 + -2.6 812,252 - BT0659 0.50 +0.4 812,253 + BT0659 0.50 -1.0 812,253 + BT0659 0.50 +0.0 812,277 + BT0659 0.53 -1.6 812,365 + BT0659 0.61 +0.2 812,411 - BT0659 0.66 -1.8 812,412 + BT0659 0.66 +1.0 812,562 - BT0659 0.80 -0.6 812,563 + BT0659 0.80 -2.0 812,597 - BT0659 0.84 +0.0 812,597 - BT0659 0.84 +0.0 812,602 - BT0659 0.84 +0.4 812,791 + -1.0 812,792 - -2.1 812,803 + +0.0 812,843 + -2.3 813,197 + BT0660 0.21 -3.2 813,222 - BT0660 0.23 +0.6 813,230 - BT0660 0.24 -2.6 813,230 - BT0660 0.24 -1.0 813,242 + BT0660 0.25 +0.0 813,246 + BT0660 0.25 +0.0 813,272 + BT0660 0.28 -3.0 813,273 - BT0660 0.28 +1.0 813,336 - BT0660 0.33 +1.0 813,427 + BT0660 0.41 -0.8 813,428 - BT0660 0.41 -0.4 813,475 + BT0660 0.45 -1.0 813,516 - BT0660 0.49 -1.8 813,545 + BT0660 0.51 +0.9 813,556 - BT0660 0.52 +0.0 813,579 + BT0660 0.54 +1.0 813,641 + BT0660 0.60 -1.0 813,642 - BT0660 0.60 +0.0 813,810 - BT0660 0.74 -1.0 814,507 - +0.0 814,645 + -1.0 814,646 - -2.6 814,763 - -2.4 814,879 + -2.0 814,902 + +0.0 815,043 + BT0661 0.15 -1.6 815,043 + BT0661 0.15 -1.0 815,044 - BT0661 0.15 +0.0
Or see this region's nucleotide sequence