Experiment: L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0707 and BT0708 are separated by 299 nucleotides BT0708 and BT0709 are separated by 224 nucleotides BT0709 and BT0710 are separated by 99 nucleotides
BT0707: BT0707 - conserved hypothetical protein (NCBI ptt file), at 880,513 to 881,001
BT0707
BT0708: BT0708 - hypothetical protein (NCBI ptt file), at 881,301 to 881,546
BT0708
BT0709: BT0709 - hypothetical protein (NCBI ptt file), at 881,771 to 884,146
BT0709
BT0710: BT0710 - hypothetical protein (NCBI ptt file), at 884,246 to 884,611
BT0710
Position (kb) 881
882
883
884
885 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 880.844 kb on + strand, within BT0707 at 881.147 kb on + strand at 881.147 kb on + strand at 881.452 kb on - strand, within BT0708 at 881.460 kb on - strand, within BT0708 at 881.463 kb on + strand, within BT0708 at 881.463 kb on + strand, within BT0708 at 881.598 kb on + strand at 881.618 kb on + strand at 881.618 kb on + strand at 881.622 kb on - strand at 881.770 kb on - strand at 881.995 kb on + strand at 881.996 kb on - strand at 882.010 kb on + strand, within BT0709 at 882.051 kb on - strand, within BT0709 at 882.182 kb on - strand, within BT0709 at 882.814 kb on - strand, within BT0709 at 882.946 kb on - strand, within BT0709 at 883.003 kb on + strand, within BT0709 at 883.437 kb on + strand, within BT0709 at 883.636 kb on - strand, within BT0709 at 883.778 kb on - strand, within BT0709 at 883.906 kb on + strand, within BT0709 at 883.907 kb on - strand, within BT0709 at 883.907 kb on - strand, within BT0709 at 884.131 kb on - strand at 884.159 kb on - strand at 884.161 kb on - strand at 884.161 kb on - strand at 884.161 kb on - strand at 884.320 kb on - strand, within BT0710 at 884.573 kb on - strand, within BT0710 at 884.606 kb on + strand at 884.835 kb on - strand at 884.844 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen remove 880,844 + BT0707 0.68 -0.1 881,147 + -2.5 881,147 + -2.1 881,452 - BT0708 0.61 -1.6 881,460 - BT0708 0.65 -2.9 881,463 + BT0708 0.66 -0.1 881,463 + BT0708 0.66 -0.6 881,598 + -1.9 881,618 + -0.1 881,618 + -0.5 881,622 - -2.1 881,770 - -2.9 881,995 + +0.9 881,996 - -2.1 882,010 + BT0709 0.10 +2.3 882,051 - BT0709 0.12 -0.1 882,182 - BT0709 0.17 +0.4 882,814 - BT0709 0.44 -0.1 882,946 - BT0709 0.49 +1.5 883,003 + BT0709 0.52 +1.9 883,437 + BT0709 0.70 +0.2 883,636 - BT0709 0.78 -1.7 883,778 - BT0709 0.84 +0.5 883,906 + BT0709 0.90 -0.4 883,907 - BT0709 0.90 -1.1 883,907 - BT0709 0.90 +0.9 884,131 - -1.6 884,159 - -0.1 884,161 - -1.6 884,161 - -0.1 884,161 - -0.1 884,320 - BT0710 0.20 -2.4 884,573 - BT0710 0.89 -3.4 884,606 + -2.4 884,835 - -2.2 884,844 + -2.6
Or see this region's nucleotide sequence