Experiment: L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0664 and BT0665 are separated by 8 nucleotides BT0665 and BT0666 overlap by 1 nucleotides BT0666 and BT0667 are separated by 12 nucleotides BT0667 and BT0668 are separated by 1 nucleotides
BT0664: BT0664 - hypothetical protein (NCBI ptt file), at 818,740 to 819,888
BT0664
BT0665: BT0665 - hypothetical protein (NCBI ptt file), at 819,897 to 820,535
BT0665
BT0666: BT0666 - hypothetical protein (NCBI ptt file), at 820,535 to 821,680
BT0666
BT0667: BT0667 - signal peptidase I (SPase I) (NCBI ptt file), at 821,693 to 822,415
BT0667
BT0668: BT0668 - hypothetical protein (NCBI ptt file), at 822,417 to 824,366
BT0668
Position (kb) 820
821
822 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 819.545 kb on + strand, within BT0664 at 819.622 kb on + strand, within BT0664 at 819.689 kb on - strand, within BT0664 at 819.713 kb on - strand, within BT0664 at 819.742 kb on + strand, within BT0664 at 819.743 kb on - strand, within BT0664 at 819.743 kb on - strand, within BT0664 at 819.855 kb on + strand at 819.981 kb on - strand, within BT0665 at 820.034 kb on - strand, within BT0665 at 820.102 kb on - strand, within BT0665 at 820.123 kb on + strand, within BT0665 at 820.123 kb on + strand, within BT0665 at 820.123 kb on + strand, within BT0665 at 820.206 kb on - strand, within BT0665 at 820.349 kb on - strand, within BT0665 at 820.355 kb on - strand, within BT0665 at 820.404 kb on - strand, within BT0665 at 820.419 kb on - strand, within BT0665 at 820.584 kb on + strand at 820.589 kb on - strand at 820.645 kb on + strand at 820.657 kb on - strand, within BT0666 at 820.670 kb on + strand, within BT0666 at 820.758 kb on - strand, within BT0666 at 820.789 kb on - strand, within BT0666 at 820.790 kb on - strand, within BT0666 at 820.790 kb on - strand, within BT0666 at 820.794 kb on - strand, within BT0666 at 820.853 kb on + strand, within BT0666 at 820.854 kb on - strand, within BT0666 at 820.864 kb on - strand, within BT0666 at 820.964 kb on - strand, within BT0666 at 821.018 kb on - strand, within BT0666 at 821.023 kb on + strand, within BT0666 at 821.194 kb on + strand, within BT0666 at 821.203 kb on - strand, within BT0666 at 821.203 kb on - strand, within BT0666 at 821.227 kb on - strand, within BT0666 at 821.229 kb on - strand, within BT0666 at 821.235 kb on - strand, within BT0666 at 821.267 kb on + strand, within BT0666 at 821.332 kb on + strand, within BT0666 at 821.524 kb on + strand, within BT0666 at 821.525 kb on - strand, within BT0666 at 821.546 kb on - strand, within BT0666 at 821.602 kb on - strand at 821.645 kb on - strand at 821.685 kb on - strand at 821.792 kb on - strand, within BT0667 at 821.842 kb on - strand, within BT0667 at 822.055 kb on - strand, within BT0667 at 822.057 kb on - strand, within BT0667 at 822.057 kb on - strand, within BT0667 at 822.113 kb on - strand, within BT0667 at 822.131 kb on - strand, within BT0667 at 822.134 kb on - strand, within BT0667 at 822.138 kb on - strand, within BT0667 at 822.190 kb on - strand, within BT0667 at 822.507 kb on + strand at 822.633 kb on + strand, within BT0668
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen remove 819,545 + BT0664 0.70 -0.0 819,622 + BT0664 0.77 -0.0 819,689 - BT0664 0.83 -0.0 819,713 - BT0664 0.85 -1.6 819,742 + BT0664 0.87 -1.6 819,743 - BT0664 0.87 -2.9 819,743 - BT0664 0.87 -1.0 819,855 + -1.0 819,981 - BT0665 0.13 +0.6 820,034 - BT0665 0.21 -0.0 820,102 - BT0665 0.32 -0.0 820,123 + BT0665 0.35 -0.0 820,123 + BT0665 0.35 -0.4 820,123 + BT0665 0.35 -1.0 820,206 - BT0665 0.48 -1.0 820,349 - BT0665 0.71 -2.6 820,355 - BT0665 0.72 -0.0 820,404 - BT0665 0.79 -0.0 820,419 - BT0665 0.82 -0.0 820,584 + -2.3 820,589 - -3.3 820,645 + -0.0 820,657 - BT0666 0.11 +2.6 820,670 + BT0666 0.12 -3.0 820,758 - BT0666 0.19 -0.0 820,789 - BT0666 0.22 +2.8 820,790 - BT0666 0.22 -1.6 820,790 - BT0666 0.22 -1.0 820,794 - BT0666 0.23 -1.0 820,853 + BT0666 0.28 -0.0 820,854 - BT0666 0.28 -0.8 820,864 - BT0666 0.29 -0.0 820,964 - BT0666 0.37 -2.6 821,018 - BT0666 0.42 -0.5 821,023 + BT0666 0.43 +1.6 821,194 + BT0666 0.58 +0.6 821,203 - BT0666 0.58 -0.0 821,203 - BT0666 0.58 +0.7 821,227 - BT0666 0.60 -2.1 821,229 - BT0666 0.61 -2.8 821,235 - BT0666 0.61 -1.0 821,267 + BT0666 0.64 -0.0 821,332 + BT0666 0.70 +1.6 821,524 + BT0666 0.86 -2.0 821,525 - BT0666 0.86 -0.0 821,546 - BT0666 0.88 -0.0 821,602 - -2.9 821,645 - -2.6 821,685 - -2.3 821,792 - BT0667 0.14 -2.5 821,842 - BT0667 0.21 -1.1 822,055 - BT0667 0.50 -1.6 822,057 - BT0667 0.50 +2.3 822,057 - BT0667 0.50 -2.6 822,113 - BT0667 0.58 -1.6 822,131 - BT0667 0.61 -0.0 822,134 - BT0667 0.61 -0.4 822,138 - BT0667 0.62 -3.6 822,190 - BT0667 0.69 -2.0 822,507 + -0.0 822,633 + BT0668 0.11 -1.6
Or see this region's nucleotide sequence