Experiment: L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0608 and BT0609 are separated by 531 nucleotides BT0609 and BT0610 are separated by 21 nucleotides
BT0608: BT0608 - glycosyltransferase (NCBI ptt file), at 750,019 to 751,098
BT0608
BT0609: BT0609 - glycosyltransferase (NCBI ptt file), at 751,630 to 752,769
BT0609
BT0610: BT0610 - lipopolysaccharide biosynthesis protein, putative glycosyltransferase (NCBI ptt file), at 752,791 to 753,981
BT0610
Position (kb) 751
752
753 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 750.738 kb on - strand, within BT0608 at 750.738 kb on - strand, within BT0608 at 750.769 kb on - strand, within BT0608 at 750.778 kb on + strand, within BT0608 at 750.837 kb on + strand, within BT0608 at 750.870 kb on + strand, within BT0608 at 751.081 kb on - strand at 751.150 kb on - strand at 751.299 kb on - strand at 751.442 kb on - strand at 751.442 kb on - strand at 751.588 kb on + strand at 751.621 kb on + strand at 751.673 kb on - strand at 751.767 kb on - strand, within BT0609 at 751.841 kb on - strand, within BT0609 at 751.847 kb on - strand, within BT0609 at 751.881 kb on + strand, within BT0609 at 751.955 kb on + strand, within BT0609 at 751.995 kb on + strand, within BT0609 at 752.065 kb on - strand, within BT0609 at 752.083 kb on - strand, within BT0609 at 752.151 kb on + strand, within BT0609 at 752.227 kb on + strand, within BT0609 at 752.373 kb on + strand, within BT0609 at 752.659 kb on - strand at 752.671 kb on - strand at 752.755 kb on - strand at 752.920 kb on + strand, within BT0610 at 752.950 kb on - strand, within BT0610 at 752.987 kb on + strand, within BT0610 at 752.995 kb on - strand, within BT0610 at 753.070 kb on - strand, within BT0610 at 753.119 kb on + strand, within BT0610 at 753.202 kb on - strand, within BT0610 at 753.268 kb on - strand, within BT0610 at 753.310 kb on - strand, within BT0610 at 753.373 kb on + strand, within BT0610 at 753.418 kb on - strand, within BT0610 at 753.418 kb on - strand, within BT0610 at 753.545 kb on - strand, within BT0610 at 753.583 kb on - strand at 753.609 kb on + strand, within BT0610 at 753.610 kb on - strand, within BT0610 at 753.611 kb on + strand, within BT0610 at 753.611 kb on + strand, within BT0610 at 753.613 kb on + strand, within BT0610 at 753.666 kb on + strand, within BT0610 at 753.698 kb on - strand, within BT0610 at 753.744 kb on - strand, within BT0610 at 753.748 kb on - strand, within BT0610 at 753.751 kb on - strand, within BT0610
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen remove 750,738 - BT0608 0.67 -1.6 750,738 - BT0608 0.67 -1.5 750,769 - BT0608 0.69 -1.6 750,778 + BT0608 0.70 -1.6 750,837 + BT0608 0.76 -2.8 750,870 + BT0608 0.79 -2.6 751,081 - -1.9 751,150 - -1.6 751,299 - -1.2 751,442 - -1.8 751,442 - -2.0 751,588 + -0.0 751,621 + -2.0 751,673 - -0.6 751,767 - BT0609 0.12 -0.0 751,841 - BT0609 0.19 -2.8 751,847 - BT0609 0.19 -3.3 751,881 + BT0609 0.22 -1.6 751,955 + BT0609 0.29 -1.3 751,995 + BT0609 0.32 -1.0 752,065 - BT0609 0.38 -1.9 752,083 - BT0609 0.40 -2.6 752,151 + BT0609 0.46 -2.6 752,227 + BT0609 0.52 -2.3 752,373 + BT0609 0.65 -1.0 752,659 - -1.0 752,671 - +1.0 752,755 - -1.0 752,920 + BT0610 0.11 -2.0 752,950 - BT0610 0.13 -0.6 752,987 + BT0610 0.16 -2.0 752,995 - BT0610 0.17 -1.6 753,070 - BT0610 0.23 -1.0 753,119 + BT0610 0.28 -0.0 753,202 - BT0610 0.35 -2.0 753,268 - BT0610 0.40 -3.0 753,310 - BT0610 0.44 -0.8 753,373 + BT0610 0.49 -2.3 753,418 - BT0610 0.53 -0.8 753,418 - BT0610 0.53 -0.0 753,545 - BT0610 0.63 -0.3 753,583 - -1.0 753,609 + BT0610 0.69 -2.0 753,610 - BT0610 0.69 -1.6 753,611 + BT0610 0.69 -2.8 753,611 + BT0610 0.69 -0.0 753,613 + BT0610 0.69 -1.0 753,666 + BT0610 0.73 -2.8 753,698 - BT0610 0.76 -1.8 753,744 - BT0610 0.80 -1.8 753,748 - BT0610 0.80 -2.8 753,751 - BT0610 0.81 -2.6
Or see this region's nucleotide sequence