Experiment: L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0293 and BT0294 are separated by 38 nucleotides BT0294 and BT0295 are separated by 268 nucleotides
BT0293: BT0293 - hypothetical protein (NCBI ptt file), at 341,869 to 343,101
BT0293
BT0294: BT0294 - hypothetical protein (NCBI ptt file), at 343,140 to 344,570
BT0294
BT0295: BT0295 - ABC transporter ATP-binding protein (NCBI ptt file), at 344,839 to 345,732
BT0295
Position (kb) 343
344
345 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 342.334 kb on - strand, within BT0293 at 342.355 kb on - strand, within BT0293 at 342.355 kb on - strand, within BT0293 at 342.631 kb on - strand, within BT0293 at 342.733 kb on - strand, within BT0293 at 342.767 kb on - strand, within BT0293 at 342.815 kb on - strand, within BT0293 at 342.839 kb on - strand, within BT0293 at 343.161 kb on + strand at 343.408 kb on + strand, within BT0294 at 343.409 kb on - strand, within BT0294 at 343.416 kb on + strand, within BT0294 at 343.547 kb on - strand, within BT0294 at 343.568 kb on + strand, within BT0294 at 343.568 kb on + strand, within BT0294 at 343.568 kb on + strand, within BT0294 at 343.569 kb on - strand, within BT0294 at 343.569 kb on - strand, within BT0294 at 343.592 kb on + strand, within BT0294 at 343.740 kb on - strand, within BT0294 at 343.761 kb on - strand, within BT0294 at 343.826 kb on - strand, within BT0294 at 343.838 kb on - strand, within BT0294 at 343.947 kb on - strand, within BT0294 at 343.951 kb on + strand, within BT0294 at 343.955 kb on + strand, within BT0294 at 344.034 kb on + strand, within BT0294 at 344.035 kb on - strand, within BT0294 at 344.043 kb on - strand, within BT0294 at 344.243 kb on - strand, within BT0294 at 344.285 kb on + strand, within BT0294 at 344.366 kb on + strand, within BT0294 at 344.388 kb on - strand, within BT0294 at 344.403 kb on - strand, within BT0294 at 344.426 kb on + strand, within BT0294 at 344.452 kb on - strand at 344.453 kb on + strand at 344.456 kb on + strand at 344.460 kb on - strand at 344.494 kb on - strand at 344.515 kb on - strand at 344.653 kb on - strand at 344.707 kb on + strand at 344.708 kb on - strand at 344.749 kb on - strand at 344.799 kb on - strand at 344.863 kb on - strand at 344.863 kb on - strand at 344.940 kb on - strand, within BT0295 at 344.970 kb on - strand, within BT0295 at 345.229 kb on + strand, within BT0295 at 345.230 kb on - strand, within BT0295 at 345.230 kb on - strand, within BT0295 at 345.230 kb on - strand, within BT0295 at 345.288 kb on - strand, within BT0295 at 345.288 kb on - strand, within BT0295 at 345.400 kb on - strand, within BT0295 at 345.409 kb on - strand, within BT0295 at 345.445 kb on - strand, within BT0295
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen remove 342,334 - BT0293 0.38 -1.2 342,355 - BT0293 0.39 -1.9 342,355 - BT0293 0.39 -2.8 342,631 - BT0293 0.62 -0.0 342,733 - BT0293 0.70 -0.4 342,767 - BT0293 0.73 -1.0 342,815 - BT0293 0.77 -2.3 342,839 - BT0293 0.79 -2.6 343,161 + +1.0 343,408 + BT0294 0.19 -2.8 343,409 - BT0294 0.19 +4.0 343,416 + BT0294 0.19 -0.0 343,547 - BT0294 0.28 -2.0 343,568 + BT0294 0.30 -1.6 343,568 + BT0294 0.30 -0.0 343,568 + BT0294 0.30 -1.6 343,569 - BT0294 0.30 +2.6 343,569 - BT0294 0.30 +1.0 343,592 + BT0294 0.32 -1.0 343,740 - BT0294 0.42 -0.0 343,761 - BT0294 0.43 -0.0 343,826 - BT0294 0.48 -1.1 343,838 - BT0294 0.49 -3.8 343,947 - BT0294 0.56 -0.0 343,951 + BT0294 0.57 -1.0 343,955 + BT0294 0.57 -1.0 344,034 + BT0294 0.62 -1.6 344,035 - BT0294 0.63 -2.6 344,043 - BT0294 0.63 -1.0 344,243 - BT0294 0.77 -1.6 344,285 + BT0294 0.80 -0.0 344,366 + BT0294 0.86 -0.0 344,388 - BT0294 0.87 -0.0 344,403 - BT0294 0.88 -3.6 344,426 + BT0294 0.90 -1.6 344,452 - +0.6 344,453 + -0.0 344,456 + -0.8 344,460 - -1.0 344,494 - -1.0 344,515 - -2.6 344,653 - -2.6 344,707 + -0.0 344,708 - -2.0 344,749 - -0.0 344,799 - -2.3 344,863 - -1.3 344,863 - -2.6 344,940 - BT0295 0.11 -1.0 344,970 - BT0295 0.15 -1.3 345,229 + BT0295 0.44 -3.5 345,230 - BT0295 0.44 -1.6 345,230 - BT0295 0.44 -0.6 345,230 - BT0295 0.44 -1.6 345,288 - BT0295 0.50 -0.0 345,288 - BT0295 0.50 -3.6 345,400 - BT0295 0.63 -1.9 345,409 - BT0295 0.64 -1.6 345,445 - BT0295 0.68 -1.3
Or see this region's nucleotide sequence