Experiment: L-Serine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0449 and BT0450 are separated by 88 nucleotides BT0450 and BT0451 are separated by 19 nucleotides
BT0449: BT0449 - conserved hypothetical protein, putative S-layer related protein precursor (NCBI ptt file), at 547,436 to 548,797
BT0449
BT0450: BT0450 - conserved hypothetical protein (NCBI ptt file), at 548,886 to 550,583
BT0450
BT0451: BT0451 - putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file), at 550,603 to 552,264
BT0451
Position (kb) 548
549
550
551 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 548.164 kb on - strand, within BT0449 at 548.183 kb on + strand, within BT0449 at 548.272 kb on + strand, within BT0449 at 548.340 kb on - strand, within BT0449 at 548.361 kb on + strand, within BT0449 at 548.362 kb on - strand, within BT0449 at 548.369 kb on + strand, within BT0449 at 548.369 kb on + strand, within BT0449 at 548.481 kb on - strand, within BT0449 at 548.484 kb on + strand, within BT0449 at 548.525 kb on + strand, within BT0449 at 548.525 kb on + strand, within BT0449 at 548.582 kb on - strand, within BT0449 at 548.587 kb on + strand, within BT0449 at 548.626 kb on + strand at 548.626 kb on + strand, within BT0449 at 548.635 kb on + strand, within BT0449 at 548.635 kb on + strand, within BT0449 at 548.843 kb on - strand at 548.864 kb on + strand at 548.927 kb on + strand at 548.988 kb on + strand at 549.110 kb on + strand, within BT0450 at 549.111 kb on - strand, within BT0450 at 549.152 kb on + strand, within BT0450 at 549.157 kb on - strand, within BT0450 at 549.163 kb on - strand at 549.264 kb on - strand, within BT0450 at 549.267 kb on - strand, within BT0450 at 549.403 kb on - strand, within BT0450 at 549.424 kb on - strand, within BT0450 at 549.455 kb on + strand, within BT0450 at 549.458 kb on + strand, within BT0450 at 549.458 kb on + strand, within BT0450 at 549.488 kb on + strand, within BT0450 at 549.489 kb on - strand, within BT0450 at 549.510 kb on - strand, within BT0450 at 549.531 kb on + strand, within BT0450 at 549.581 kb on - strand, within BT0450 at 549.614 kb on - strand, within BT0450 at 549.706 kb on - strand, within BT0450 at 549.752 kb on + strand, within BT0450 at 549.753 kb on - strand, within BT0450 at 549.753 kb on - strand, within BT0450 at 549.771 kb on - strand, within BT0450 at 549.800 kb on + strand, within BT0450 at 550.176 kb on - strand, within BT0450 at 550.238 kb on - strand, within BT0450 at 550.293 kb on - strand, within BT0450 at 550.298 kb on + strand, within BT0450 at 550.299 kb on - strand, within BT0450 at 550.299 kb on - strand, within BT0450 at 550.335 kb on - strand, within BT0450 at 550.353 kb on + strand, within BT0450 at 550.680 kb on + strand at 550.759 kb on - strand at 550.823 kb on + strand, within BT0451 at 550.838 kb on + strand, within BT0451 at 550.945 kb on - strand, within BT0451 at 551.038 kb on - strand, within BT0451 at 551.165 kb on + strand, within BT0451 at 551.244 kb on - strand, within BT0451 at 551.274 kb on + strand, within BT0451 at 551.316 kb on - strand, within BT0451 at 551.330 kb on - strand, within BT0451 at 551.373 kb on + strand, within BT0451 at 551.520 kb on + strand, within BT0451 at 551.521 kb on - strand, within BT0451
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen remove 548,164 - BT0449 0.53 +0.8 548,183 + BT0449 0.55 -1.6 548,272 + BT0449 0.61 -2.0 548,340 - BT0449 0.66 -2.3 548,361 + BT0449 0.68 -1.7 548,362 - BT0449 0.68 +1.6 548,369 + BT0449 0.69 +0.6 548,369 + BT0449 0.69 -1.0 548,481 - BT0449 0.77 -2.3 548,484 + BT0449 0.77 -0.0 548,525 + BT0449 0.80 -1.0 548,525 + BT0449 0.80 -0.0 548,582 - BT0449 0.84 +0.7 548,587 + BT0449 0.85 +0.9 548,626 + -1.2 548,626 + BT0449 0.87 +2.0 548,635 + BT0449 0.88 -0.4 548,635 + BT0449 0.88 -0.8 548,843 - +0.3 548,864 + -2.6 548,927 + -2.6 548,988 + -0.4 549,110 + BT0450 0.13 -0.4 549,111 - BT0450 0.13 +0.2 549,152 + BT0450 0.16 +0.7 549,157 - BT0450 0.16 -0.0 549,163 - -2.0 549,264 - BT0450 0.22 -1.0 549,267 - BT0450 0.22 +1.0 549,403 - BT0450 0.30 -2.3 549,424 - BT0450 0.32 -0.0 549,455 + BT0450 0.34 +0.4 549,458 + BT0450 0.34 +0.7 549,458 + BT0450 0.34 +1.1 549,488 + BT0450 0.35 -1.0 549,489 - BT0450 0.36 -1.0 549,510 - BT0450 0.37 -1.6 549,531 + BT0450 0.38 +2.0 549,581 - BT0450 0.41 +1.0 549,614 - BT0450 0.43 -2.0 549,706 - BT0450 0.48 +1.3 549,752 + BT0450 0.51 -1.0 549,753 - BT0450 0.51 -2.0 549,753 - BT0450 0.51 +0.4 549,771 - BT0450 0.52 -2.3 549,800 + BT0450 0.54 -1.0 550,176 - BT0450 0.76 -1.0 550,238 - BT0450 0.80 -0.3 550,293 - BT0450 0.83 +0.9 550,298 + BT0450 0.83 -2.1 550,299 - BT0450 0.83 +2.0 550,299 - BT0450 0.83 -1.7 550,335 - BT0450 0.85 +1.6 550,353 + BT0450 0.86 -0.1 550,680 + -0.0 550,759 - -0.0 550,823 + BT0451 0.13 +0.3 550,838 + BT0451 0.14 +0.6 550,945 - BT0451 0.21 -2.2 551,038 - BT0451 0.26 -0.4 551,165 + BT0451 0.34 +1.3 551,244 - BT0451 0.39 -1.4 551,274 + BT0451 0.40 +1.2 551,316 - BT0451 0.43 -2.6 551,330 - BT0451 0.44 -2.5 551,373 + BT0451 0.46 -0.8 551,520 + BT0451 0.55 +1.0 551,521 - BT0451 0.55 -2.8
Or see this region's nucleotide sequence