Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4768

Experiment: L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBT4766 and BT4767 are separated by 272 nucleotidesBT4767 and BT4768 are separated by 24 nucleotidesBT4768 and BT4769 are separated by 3 nucleotidesBT4769 and BT4770 are separated by 15 nucleotides BT4766: BT4766 - hypothetical protein (NCBI ptt file), at 6,250,925 to 6,251,353 BT4766 BT4767: BT4767 - conserved protein found in conjugate transposon (NCBI ptt file), at 6,251,626 to 6,251,925 BT4767 BT4768: BT4768 - conserved protein found in conjugate transposon (NCBI ptt file), at 6,251,950 to 6,252,270 BT4768 BT4769: BT4769 - conserved protein found in conjugate transposon (NCBI ptt file), at 6,252,274 to 6,252,444 BT4769 BT4770: BT4770 - conserved protein found in conjugate transposon (NCBI ptt file), at 6,252,460 to 6,254,778 BT4770 Position (kb) 6251 6252 6253Strain fitness (log2 ratio) -2 -1 0 1 2at 6251.099 kb on + strand, within BT4766at 6251.124 kb on + strand, within BT4766at 6251.244 kb on - strand, within BT4766at 6251.293 kb on + strand, within BT4766at 6251.309 kb on + strand, within BT4766at 6251.312 kb on - strandat 6251.544 kb on - strandat 6251.847 kb on + strand, within BT4767at 6251.847 kb on + strand, within BT4767at 6251.949 kb on + strandat 6251.949 kb on - strandat 6251.950 kb on - strandat 6252.073 kb on + strand, within BT4768at 6252.074 kb on - strand, within BT4768at 6252.074 kb on - strand, within BT4768at 6252.074 kb on - strandat 6252.075 kb on + strand, within BT4768at 6252.075 kb on + strand, within BT4768at 6252.274 kb on - strandat 6252.284 kb on + strandat 6252.753 kb on + strand, within BT4770at 6252.844 kb on + strand, within BT4770at 6252.939 kb on + strand, within BT4770at 6253.033 kb on + strand, within BT4770at 6253.072 kb on - strand, within BT4770

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen
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6,251,099 + BT4766 0.41 -1.0
6,251,124 + BT4766 0.46 -1.1
6,251,244 - BT4766 0.74 -2.4
6,251,293 + BT4766 0.86 -2.2
6,251,309 + BT4766 0.90 -1.8
6,251,312 - -1.2
6,251,544 - -0.0
6,251,847 + BT4767 0.74 -2.2
6,251,847 + BT4767 0.74 -2.6
6,251,949 + -2.4
6,251,949 - -2.4
6,251,950 - -0.4
6,252,073 + BT4768 0.38 -1.0
6,252,074 - BT4768 0.39 +2.2
6,252,074 - BT4768 0.39 -0.2
6,252,074 - -2.6
6,252,075 + BT4768 0.39 -0.6
6,252,075 + BT4768 0.39 +0.6
6,252,274 - -1.0
6,252,284 + -0.0
6,252,753 + BT4770 0.13 -0.6
6,252,844 + BT4770 0.17 -2.0
6,252,939 + BT4770 0.21 -1.0
6,253,033 + BT4770 0.25 -0.0
6,253,072 - BT4770 0.26 -0.5

Or see this region's nucleotide sequence