Experiment: Beta-Lactose 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0468 and BT0469 are separated by 38 nucleotides BT0469 and BT0470 overlap by 1 nucleotides
BT0468: BT0468 - putative F420H2-dehydrogenase 40 kDa subunit (NCBI ptt file), at 579,055 to 580,221
BT0468
BT0469: BT0469 - hypothetical protein (NCBI ptt file), at 580,260 to 581,522
BT0469
BT0470: BT0470 - hypothetical protein (NCBI ptt file), at 581,522 to 582,751
BT0470
Position (kb) 580
581
582 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 579.334 kb on - strand, within BT0468 at 579.347 kb on + strand, within BT0468 at 579.503 kb on - strand, within BT0468 at 579.551 kb on + strand, within BT0468 at 579.577 kb on - strand, within BT0468 at 579.637 kb on - strand, within BT0468 at 579.639 kb on - strand, within BT0468 at 579.641 kb on - strand, within BT0468 at 580.026 kb on - strand, within BT0468 at 580.074 kb on + strand, within BT0468 at 580.135 kb on - strand at 580.287 kb on - strand at 580.287 kb on - strand at 580.304 kb on + strand at 580.356 kb on + strand at 580.428 kb on - strand, within BT0469 at 580.468 kb on - strand, within BT0469 at 580.472 kb on + strand, within BT0469 at 580.472 kb on + strand, within BT0469 at 580.473 kb on - strand, within BT0469 at 580.503 kb on - strand, within BT0469 at 580.513 kb on - strand, within BT0469 at 580.524 kb on - strand, within BT0469 at 580.606 kb on - strand, within BT0469 at 580.639 kb on + strand, within BT0469 at 580.889 kb on - strand, within BT0469 at 580.988 kb on - strand, within BT0469 at 581.052 kb on - strand, within BT0469 at 581.089 kb on - strand, within BT0469 at 581.243 kb on - strand, within BT0469 at 581.258 kb on - strand, within BT0469 at 581.597 kb on + strand at 581.624 kb on - strand at 581.633 kb on - strand at 581.675 kb on - strand, within BT0470 at 581.797 kb on - strand, within BT0470 at 581.966 kb on - strand, within BT0470 at 582.071 kb on - strand, within BT0470 at 582.086 kb on - strand, within BT0470 at 582.100 kb on - strand, within BT0470 at 582.115 kb on - strand, within BT0470 at 582.115 kb on - strand, within BT0470 at 582.125 kb on - strand, within BT0470 at 582.125 kb on - strand, within BT0470 at 582.152 kb on - strand, within BT0470 at 582.257 kb on - strand, within BT0470 at 582.260 kb on - strand, within BT0470 at 582.260 kb on - strand, within BT0470 at 582.303 kb on - strand, within BT0470 at 582.307 kb on - strand, within BT0470 at 582.307 kb on - strand, within BT0470 at 582.391 kb on - strand, within BT0470 at 582.409 kb on - strand, within BT0470 at 582.426 kb on - strand, within BT0470 at 582.449 kb on - strand, within BT0470 at 582.498 kb on - strand, within BT0470 at 582.509 kb on - strand, within BT0470
Per-strain Table
Position Strand Gene LocusTag Fraction Beta-Lactose 2.5 mg/ml (C) remove 579,334 - BT0468 0.24 -1.1 579,347 + BT0468 0.25 -2.5 579,503 - BT0468 0.38 -0.1 579,551 + BT0468 0.43 -1.7 579,577 - BT0468 0.45 -1.7 579,637 - BT0468 0.50 -0.1 579,639 - BT0468 0.50 -0.5 579,641 - BT0468 0.50 -1.1 580,026 - BT0468 0.83 -1.3 580,074 + BT0468 0.87 -0.1 580,135 - -0.1 580,287 - -0.1 580,287 - -1.6 580,304 + +1.9 580,356 + -1.1 580,428 - BT0469 0.13 -0.1 580,468 - BT0469 0.16 -2.4 580,472 + BT0469 0.17 -1.1 580,472 + BT0469 0.17 -0.1 580,473 - BT0469 0.17 -2.2 580,503 - BT0469 0.19 -2.4 580,513 - BT0469 0.20 +1.5 580,524 - BT0469 0.21 -1.3 580,606 - BT0469 0.27 -1.2 580,639 + BT0469 0.30 -1.1 580,889 - BT0469 0.50 -0.1 580,988 - BT0469 0.58 -1.1 581,052 - BT0469 0.63 -1.7 581,089 - BT0469 0.66 -3.3 581,243 - BT0469 0.78 -2.1 581,258 - BT0469 0.79 -3.7 581,597 + -0.1 581,624 - -0.1 581,633 - -2.1 581,675 - BT0470 0.12 +0.9 581,797 - BT0470 0.22 -0.1 581,966 - BT0470 0.36 -1.1 582,071 - BT0470 0.45 -1.7 582,086 - BT0470 0.46 -0.7 582,100 - BT0470 0.47 -1.1 582,115 - BT0470 0.48 -1.7 582,115 - BT0470 0.48 -1.7 582,125 - BT0470 0.49 -2.2 582,125 - BT0470 0.49 -0.9 582,152 - BT0470 0.51 -1.1 582,257 - BT0470 0.60 -1.8 582,260 - BT0470 0.60 -1.1 582,260 - BT0470 0.60 -2.1 582,303 - BT0470 0.63 +1.5 582,307 - BT0470 0.64 -1.1 582,307 - BT0470 0.64 -2.7 582,391 - BT0470 0.71 -0.5 582,409 - BT0470 0.72 -0.6 582,426 - BT0470 0.73 -2.9 582,449 - BT0470 0.75 -0.1 582,498 - BT0470 0.79 -1.1 582,509 - BT0470 0.80 -0.1
Or see this region's nucleotide sequence