Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4242

Experiment: Beta-Lactose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose 2.5 mg/ml (C)
5,586,494	+		BT4241	0.73	-0.0
5,586,549	+		BT4241	0.75	-0.6
5,586,550	-		BT4241	0.75	-1.6
5,586,550	-		BT4241	0.75	-1.0
5,586,575	+		BT4241	0.76	-0.0
5,586,575	+		BT4241	0.76	-2.6
5,586,666	-		BT4241	0.78	-0.0
5,586,744	+		BT4241	0.81	-0.0
5,586,745	-		BT4241	0.81	-0.9
5,586,796	-		BT4241	0.82	-0.6
5,586,830	-		BT4241	0.83	-2.0
5,586,905	+		BT4241	0.86	-0.3
5,586,924	+		BT4241	0.86	-0.0
5,586,930	+		BT4241	0.86	-2.0
5,586,930	+		BT4241	0.86	-0.0
5,586,930	+		BT4241	0.86	-0.9
5,586,930	+		BT4241	0.86	-1.6
5,586,931	-		BT4241	0.86	-1.0
5,586,931	-		BT4241	0.86	-0.9
5,586,931	-		BT4241	0.86	+1.5
5,586,931	-		BT4241	0.86	-0.0
5,586,932	+		BT4241	0.86	-3.0
5,586,963	+		BT4241	0.87	-1.6
5,586,963	+		BT4241	0.87	-1.4
5,587,112	+				-1.6
5,587,139	-				-0.8
5,587,242	+				-1.2
5,587,243	-				-0.0
5,587,245	+				-2.0
5,587,424	+				-2.0
5,587,432	-				-1.0
5,587,485	+				-0.4
5,587,558	-				-0.4
5,587,708	-		BT4242	0.27	-1.6
5,587,802	-		BT4242	0.37	-2.0
5,587,885	+		BT4242	0.46	-0.0
5,587,886	-		BT4242	0.47	-2.6
5,587,896	-		BT4242	0.48	-3.0
5,588,152	-				-0.0
5,588,162	+		BT4242	0.78	-1.8
5,588,166	+		BT4242	0.78	+0.5
5,588,166	+		BT4242	0.78	-1.6
5,588,168	+		BT4242	0.78	-2.5
5,588,169	-		BT4242	0.78	-1.6
5,588,202	+		BT4242	0.82	-1.6
5,588,203	-		BT4242	0.82	-0.0
5,588,364	-				-1.3
5,588,374	-				-1.0
5,588,374	-				-0.0
5,588,377	-				-1.1
5,588,440	+				-0.5
5,588,453	+				-0.0
5,588,456	+				-0.8
5,588,586	+				-1.6
5,588,670	+		BT4243	0.14	+1.0
5,588,670	+		BT4243	0.14	-1.0
5,588,672	+		BT4243	0.14	-1.3
5,588,673	-		BT4243	0.14	-1.4
5,588,696	-		BT4243	0.16	-1.0
5,588,741	+		BT4243	0.19	-0.5
5,588,742	-		BT4243	0.19	-1.0
5,588,776	+		BT4243	0.22	-1.0
5,588,820	+		BT4243	0.25	-2.3
5,588,821	-		BT4243	0.25	-2.6
5,588,836	-		BT4243	0.26	+1.0
5,588,849	+		BT4243	0.27	+1.0
5,588,877	-		BT4243	0.29	-1.8
5,588,904	+		BT4243	0.31	-1.0
5,588,913	-		BT4243	0.32	-2.8
5,588,929	+		BT4243	0.33	-0.8
5,588,941	+		BT4243	0.34	-2.3
5,588,942	-		BT4243	0.34	-0.6
5,589,034	-		BT4243	0.40	-1.6
5,589,038	+		BT4243	0.40	-0.4
5,589,088	-		BT4243	0.44	-0.0
5,589,146	+		BT4243	0.48	-3.4
5,589,146	+		BT4243	0.48	-2.6
5,589,148	+		BT4243	0.48	-2.8
5,589,149	-		BT4243	0.48	-1.0
5,589,174	-		BT4243	0.50	-1.2
5,589,174	-		BT4243	0.50	+0.5
5,589,198	-		BT4243	0.52	-0.0
5,589,200	+		BT4243	0.52	-1.3
5,589,227	-		BT4243	0.54	-0.0
5,589,228	+		BT4243	0.54	+0.4
5,589,229	-		BT4243	0.54	-1.0
5,589,230	+		BT4243	0.54	-2.4
5,589,230	+		BT4243	0.54	-1.6
5,589,263	-		BT4243	0.56	-1.0
5,589,311	-		BT4243	0.60	-2.0