Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1768

Experiment: Beta-Lactose 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Beta-Lactose 2.5 mg/ml (C)
2,188,580	+		BT1767	0.23	-2.1
2,188,581	-		BT1767	0.23	-0.5
2,188,587	-		BT1767	0.24	-1.1
2,188,601	+		BT1767	0.25	-2.4
2,188,823	+		BT1767	0.47	-0.5
2,188,823	+		BT1767	0.47	+1.3
2,188,823	+		BT1767	0.47	-1.7
2,188,823	+		BT1767	0.47	-1.7
2,188,858	+		BT1767	0.50	-2.1
2,188,904	+		BT1767	0.55	+0.9
2,188,911	-		BT1767	0.55	-0.9
2,189,226	+		BT1767	0.86	-0.1
2,189,259	+		BT1767	0.89	-0.2
2,189,284	-				-0.3
2,189,284	-				-0.1
2,189,331	+				-1.7
2,189,392	+				-2.1
2,189,447	-				-0.9
2,189,544	-				-0.1
2,189,607	-				-2.5
2,189,658	+				-1.1
2,189,659	-				-1.7
2,189,792	+				-1.1
2,189,807	-				+0.1
2,189,846	+				-1.1
2,189,920	-		BT1768	0.12	-1.7
2,189,920	-		BT1768	0.12	+1.5
2,189,920	-		BT1768	0.12	-1.3
2,190,055	+		BT1768	0.16	-1.0
2,190,148	+		BT1768	0.19	-0.8
2,190,160	+		BT1768	0.19	-0.1
2,190,248	+		BT1768	0.22	-2.4
2,190,262	+		BT1768	0.22	-3.5
2,190,262	+		BT1768	0.22	-2.1
2,190,262	+		BT1768	0.22	-0.1
2,190,263	-		BT1768	0.22	+0.9
2,190,265	-		BT1768	0.22	-1.1
2,190,265	-		BT1768	0.22	-1.7
2,190,265	-		BT1768	0.22	-1.7
2,190,308	-		BT1768	0.23	+0.2
2,190,308	-		BT1768	0.23	-0.7
2,190,320	-		BT1768	0.24	-1.1
2,190,340	+		BT1768	0.24	-1.4
2,190,347	-		BT1768	0.25	-1.1
2,190,347	-		BT1768	0.25	+0.3
2,190,347	-		BT1768	0.25	-2.4
2,190,383	-		BT1768	0.26	-1.4
2,190,388	+		BT1768	0.26	-2.3
2,190,395	+		BT1768	0.26	-0.9
2,190,683	+		BT1768	0.35	-0.1
2,190,686	+		BT1768	0.35	-1.7
2,190,694	-		BT1768	0.35	-1.1
2,190,711	+		BT1768	0.36	-2.1
2,190,712	-		BT1768	0.36	-1.1
2,190,740	+		BT1768	0.37	+0.7
2,190,857	+		BT1768	0.40	-0.1
2,190,858	-		BT1768	0.40	-0.3
2,191,178	+		BT1768	0.50	-1.1
2,191,310	+		BT1768	0.54	-1.5
2,191,372	-		BT1768	0.56	-1.0
2,191,437	+		BT1768	0.58	-1.3
2,191,438	-		BT1768	0.58	+0.3
2,191,522	-		BT1768	0.61	-2.4
2,191,571	+		BT1768	0.62	-1.1
2,191,572	-		BT1768	0.62	-0.8
2,191,630	-		BT1768	0.64	-0.1
2,191,705	-		BT1768	0.66	+0.9
2,191,811	-		BT1768	0.70	+1.5
2,191,848	+		BT1768	0.71	-1.9
2,191,849	-		BT1768	0.71	-0.1
2,191,850	+		BT1768	0.71	-2.1
2,191,928	-		BT1768	0.73	-0.1
2,191,965	+		BT1768	0.74	-0.1
2,192,057	+		BT1768	0.77	-0.1
2,192,159	+		BT1768	0.80	-1.7
2,192,229	+		BT1768	0.82	-0.7
2,192,500	+				-0.7
2,192,501	-				-2.4
2,192,607	+				-1.1
2,192,607	+				-1.6
2,192,618	-				-1.1
2,192,810	-				-0.1
2,192,813	+				-1.1
2,192,814	-				-0.1
2,192,815	+				-1.5
2,192,876	-				-1.1
2,192,916	-				+0.2
2,192,928	-				-0.1
2,192,928	-				-1.7
2,192,989	+				-1.2
2,193,020	+				+0.9
2,193,154	+		BT1769	0.15	-1.1
2,193,161	+		BT1769	0.15	-3.9
2,193,206	+		BT1769	0.17	-3.3
2,193,234	-		BT1769	0.18	-0.7
2,193,295	+		BT1769	0.21	-2.1
2,193,296	-		BT1769	0.21	-1.1
2,193,356	+		BT1769	0.24	+0.3
2,193,360	+		BT1769	0.24	-1.7
2,193,360	+		BT1769	0.24	-0.3
2,193,364	+		BT1769	0.24	+1.9
2,193,365	-		BT1769	0.24	-0.1
2,193,366	+		BT1769	0.24	-1.4
2,193,415	+		BT1769	0.26	-0.1
2,193,428	-		BT1769	0.27	-0.3
2,193,517	+		BT1769	0.31	-0.3
2,193,566	+		BT1769	0.33	-1.1