Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4618

Experiment: polygalacturonic; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	polygalacturonic; autoclaved 2.5 mg/ml (C)
6,044,295	-		BT4617	0.47	-1.6
6,044,298	-		BT4617	0.47	-0.7
6,044,371	-		BT4617	0.53	-0.7
6,044,371	-		BT4617	0.53	-0.0
6,044,384	+		BT4617	0.54	-1.3
6,044,417	-		BT4617	0.57	+1.0
6,044,468	+		BT4617	0.61	-1.9
6,044,534	+		BT4617	0.66	-1.7
6,044,603	-		BT4617	0.71	-0.2
6,044,753	-		BT4617	0.83	-0.0
6,044,802	-		BT4617	0.87	-0.5
6,044,802	-		BT4617	0.87	-0.0
6,044,805	+		BT4617	0.87	-2.0
6,044,805	+		BT4617	0.87	-0.7
6,044,806	-		BT4617	0.87	-0.0
6,044,839	+				+1.6
6,044,840	-				-0.0
6,044,841	+				-0.8
6,044,842	-				-1.1
6,044,867	+				+0.6
6,044,868	-				-0.0
6,044,868	-				-0.9
6,044,868	-				+0.6
6,044,871	-				-1.3
6,044,894	+				-1.6
6,044,895	-				-0.0
6,044,975	+				-2.0
6,044,978	-				+1.0
6,045,003	-				-0.0
6,045,020	+				-1.3
6,045,021	-				+0.6
6,045,021	-				-1.9
6,045,223	-				-2.0
6,045,229	+				-2.2
6,045,229	+				-1.4
6,045,231	+				-1.0
6,045,232	-				+0.6
6,045,232	-				-1.0
6,045,267	-				-1.7
6,045,285	-				+0.3
6,045,286	+				-2.8
6,045,292	-				-1.4
6,045,349	-		BT4618	0.20	+1.1
6,045,415	-		BT4618	0.39	+1.0
6,045,701	+		BT4619	0.12	+0.6
6,045,701	+		BT4619	0.12	-0.4
6,045,702	-		BT4619	0.12	-1.4
6,045,702	-		BT4619	0.12	-0.4
6,045,719	-		BT4619	0.15	-0.0
6,045,725	-		BT4619	0.16	-1.7
6,045,725	-		BT4619	0.16	-0.0
6,045,725	-		BT4619	0.16	-1.5
6,045,820	+		BT4619	0.32	+1.0
6,045,871	-		BT4619	0.41	-0.5
6,045,917	+		BT4619	0.48	+0.4
6,045,938	+		BT4619	0.52	-0.0
6,045,942	+		BT4619	0.52	-1.6
6,045,952	+		BT4619	0.54	-1.0
6,046,010	+		BT4619	0.64	-1.7
6,046,010	+		BT4619	0.64	-1.0
6,046,060	-		BT4619	0.72	-1.7
6,046,153	+		BT4619	0.88	-1.1
6,046,154	-		BT4619	0.88	-2.0
6,046,154	-		BT4619	0.88	-1.6
6,046,156	-		BT4619	0.88	-0.6
6,046,158	+		BT4619	0.88	+2.0
6,046,169	-				-1.0
6,046,169	-				-0.6
6,046,263	+				-0.6
6,046,265	+				-0.0
6,046,266	-				-0.0
6,046,266	-				-0.4
6,046,267	+				+0.6
6,046,268	-				-0.7
6,046,268	-				-1.6
6,046,271	-				-1.0
6,046,330	-				-1.0
6,046,330	-				+1.0
6,046,342	+				-1.4
6,046,502	-				-1.1
6,046,597	+				-1.0