Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1366

Experiment: polygalacturonic; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	polygalacturonic; autoclaved 2.5 mg/ml (C)
1,693,950	-				-0.2
1,694,108	+				-1.5
1,694,295	+				-0.9
1,694,295	+				-2.5
1,694,297	+				-0.1
1,694,428	-				+0.1
1,694,438	-				-0.6
1,694,438	-				-1.2
1,694,547	+				+0.1
1,694,547	+				-1.5
1,694,576	+				+0.1
1,694,689	+		BT1366	0.17	-1.2
1,694,845	-		BT1366	0.27	-1.9
1,695,104	-		BT1366	0.43	-1.5
1,695,241	+		BT1366	0.52	-0.3
1,695,428	+		BT1366	0.63	+0.1
1,695,429	-		BT1366	0.64	-1.5
1,695,429	-		BT1366	0.64	-2.2
1,695,429	-		BT1366	0.64	+0.1
1,695,429	-		BT1366	0.64	-3.1
1,695,429	-		BT1366	0.64	+1.1
1,695,440	+		BT1366	0.64	-0.5
1,695,523	+		BT1366	0.70	-2.9
1,695,523	+		BT1366	0.70	+0.1
1,695,524	-		BT1366	0.70	+0.1
1,695,529	+		BT1366	0.70	-0.9
1,695,542	-		BT1366	0.71	+0.1
1,695,580	-		BT1366	0.73	-2.7
1,695,778	-		BT1366	0.86	-1.5
1,695,877	+				+0.1
1,695,878	-				-2.2
1,695,879	+				-0.9
1,695,880	-				-1.5
1,695,880	-				-1.0
1,695,931	-				-0.1
1,695,992	-				-0.5
1,696,117	-				-0.3
1,696,117	-				+0.4
1,696,148	-				-1.5
1,696,151	+				-1.4
1,696,167	+		BT1367	0.11	+1.1
1,696,173	-		BT1367	0.11	-0.9
1,696,191	-		BT1367	0.14	+1.1
1,696,191	-		BT1367	0.14	-0.3
1,696,294	+		BT1367	0.27	-0.9
1,696,295	-		BT1367	0.27	-0.9
1,696,509	-		BT1367	0.56	+0.1
1,696,541	+		BT1367	0.60	+0.1
1,696,557	+		BT1367	0.62	+2.1
1,696,616	+		BT1367	0.70	+1.1
1,696,646	-		BT1367	0.74	-1.5
1,696,699	+		BT1367	0.81	-1.7
1,696,752	+		BT1367	0.88	+0.5
1,696,789	-				-1.9