Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4252

Experiment: Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
5,602,302	-		BT4251	0.52	+1.0
5,602,310	+		BT4251	0.53	+1.2
5,602,314	+		BT4251	0.53	-0.4
5,602,314	+		BT4251	0.53	-2.8
5,602,315	-		BT4251	0.53	-1.3
5,602,315	-		BT4251	0.53	-3.0
5,602,332	-		BT4251	0.54	+1.3
5,602,341	-		BT4251	0.54	+1.0
5,602,342	+		BT4251	0.54	-1.3
5,602,343	-		BT4251	0.54	-0.6
5,602,343	-		BT4251	0.54	-1.0
5,602,383	+		BT4251	0.57	-2.6
5,602,401	-		BT4251	0.58	-0.6
5,602,407	-		BT4251	0.58	-1.0
5,602,453	-		BT4251	0.60	-1.6
5,602,487	+		BT4251	0.62	-2.1
5,602,577	+		BT4251	0.67	+2.0
5,602,680	-		BT4251	0.73	+0.0
5,602,681	+		BT4251	0.73	-2.3
5,602,681	+		BT4251	0.73	-1.0
5,602,789	-		BT4251	0.79	+1.0
5,602,793	+		BT4251	0.79	-1.0
5,602,841	+		BT4251	0.81	-1.6
5,602,844	+		BT4251	0.82	+0.0
5,602,924	+		BT4251	0.86	-2.6
5,602,925	-		BT4251	0.86	-1.3
5,602,925	-		BT4251	0.86	-0.2
5,603,136	+				-2.0
5,603,137	-				-1.0
5,603,149	-				-1.0
5,603,170	-				+0.0
5,603,199	+				-2.3
5,603,200	+				-1.9
5,603,201	-				-1.8
5,603,213	+				+0.0
5,603,280	-				+0.2
5,603,318	+				-2.4
5,603,400	+		BT4252	0.14	-1.0
5,603,404	+		BT4252	0.14	-2.6
5,603,405	-		BT4252	0.14	-2.7
5,603,471	+		BT4252	0.20	-0.5
5,603,481	+		BT4252	0.20	-2.7
5,603,481	+		BT4252	0.20	-0.7
5,603,485	-		BT4252	0.21	-1.0
5,603,516	+		BT4252	0.23	-2.3
5,603,516	+		BT4252	0.23	+0.0
5,603,516	+		BT4252	0.23	+1.0
5,603,576	+		BT4252	0.28	+0.0
5,603,624	+		BT4252	0.32	-0.7
5,603,690	+		BT4252	0.37	-1.6
5,603,690	+		BT4252	0.37	+0.0
5,603,691	-		BT4252	0.37	-2.6
5,603,783	-		BT4252	0.44	-2.6
5,603,861	+		BT4252	0.51	-1.0
5,603,862	-		BT4252	0.51	-0.8
5,603,926	+		BT4252	0.56	-2.3
5,603,926	+		BT4252	0.56	+0.0
5,603,949	-		BT4252	0.58	-2.6
5,603,950	+		BT4252	0.58	-2.7
5,603,950	+		BT4252	0.58	-2.6
5,603,970	+		BT4252	0.59	+0.0
5,604,009	-		BT4252	0.62	-2.6
5,604,029	-		BT4252	0.64	-1.0
5,604,050	+		BT4252	0.66	-1.2
5,604,050	+		BT4252	0.66	-3.8
5,604,129	-		BT4252	0.72	-0.6
5,604,132	+		BT4252	0.72	-3.0
5,604,132	+		BT4252	0.72	-2.0
5,604,132	+		BT4252	0.72	-2.0
5,604,133	-		BT4252	0.72	+1.0
5,604,133	-		BT4252	0.72	+0.6
5,604,133	-		BT4252	0.72	-2.8
5,604,157	+		BT4252	0.74	-2.7
5,604,157	+		BT4252	0.74	-1.0
5,604,192	-		BT4252	0.77	+0.6
5,604,256	+		BT4252	0.82	-1.6
5,604,257	-		BT4252	0.82	-0.4
5,604,257	-		BT4252	0.82	-0.6
5,604,384	+				-1.6
5,604,385	-				+0.0
5,604,385	-				+0.0
5,604,406	-				-1.6
5,604,453	+				-2.1
5,604,496	+				-1.0
5,604,496	+				+0.0
5,604,496	+				-1.0
5,605,342	-				-2.6
5,605,342	-				-0.6
5,605,358	-				-1.6
5,605,400	-				+0.3
5,605,405	-				+0.2
5,605,407	-				-1.0
5,605,422	-				-2.0