Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2628

Experiment: Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
3,277,070	+		BT2627	0.71	-0.8
3,277,070	+		BT2627	0.71	-0.4
3,277,093	-		BT2627	0.73	-2.4
3,277,094	+		BT2627	0.73	-0.1
3,277,149	+		BT2627	0.77	-0.1
3,277,190	+		BT2627	0.80	-0.5
3,277,190	+		BT2627	0.80	+1.5
3,277,191	-		BT2627	0.80	-0.1
3,277,196	+				+0.9
3,277,292	+		BT2627	0.88	+0.9
3,277,354	+				-0.6
3,277,379	+				-0.1
3,277,380	-				-1.7
3,277,380	-				-1.7
3,277,415	+				-2.1
3,277,478	+				-0.4
3,277,603	+				+0.2
3,277,644	+				+1.0
3,277,648	+				-1.1
3,277,648	+				-2.0
3,277,684	+				+0.8
3,277,727	+				-3.0
3,277,753	+				-0.8
3,277,753	+				-1.7
3,277,801	+				-2.1
3,277,801	+				-0.1
3,277,827	+				-1.7
3,277,868	+				-3.4
3,277,868	+				-2.4
3,277,868	+				-0.1
3,277,872	+				-0.7
3,277,887	+				-3.5
3,277,908	+				+0.9
3,277,908	+				-1.1
3,277,908	+				+1.1
3,277,921	+				-2.0
3,277,940	+				-0.7
3,277,983	+				-1.7
3,278,143	+				-1.1
3,278,143	+				-2.7
3,278,201	+				-1.1
3,278,201	+				-1.1
3,278,201	+				-1.4
3,278,227	+				-1.7
3,278,227	+				-1.1
3,278,232	+				-0.1
3,278,260	+				-1.1
3,278,260	+				-0.1
3,278,260	+				-2.9
3,278,333	+				-1.8
3,278,397	+		BT2628	0.11	+0.0
3,278,397	+		BT2628	0.11	-2.0
3,278,414	+		BT2628	0.12	-1.7
3,278,481	+		BT2628	0.13	+1.5
3,278,481	+		BT2628	0.13	-0.9
3,278,490	+		BT2628	0.14	-1.1
3,278,568	+		BT2628	0.16	-1.7
3,278,762	-		BT2628	0.20	-2.3
3,278,774	+		BT2628	0.21	-0.9
3,278,774	+		BT2628	0.21	+0.9
3,278,775	-		BT2628	0.21	-2.1
3,278,842	-		BT2628	0.22	-2.1
3,278,866	-		BT2628	0.23	-1.7
3,278,907	+		BT2628	0.24	-1.7
3,278,908	-		BT2628	0.24	-0.7
3,278,909	+		BT2628	0.24	-2.7
3,278,909	+		BT2628	0.24	-1.7
3,278,909	+		BT2628	0.24	-0.1
3,278,910	-		BT2628	0.24	+0.9
3,278,998	-		BT2628	0.26	-1.4
3,279,024	+		BT2628	0.27	-1.1
3,279,024	+		BT2628	0.27	-1.7
3,279,090	+		BT2628	0.29	-1.5
3,279,114	+		BT2628	0.29	-0.8
3,279,136	-		BT2628	0.30	-0.8
3,279,141	+		BT2628	0.30	-3.1
3,279,147	+		BT2628	0.30	-1.1
3,279,289	+		BT2628	0.33	-2.1
3,279,290	-		BT2628	0.33	-4.1
3,279,380	-		BT2628	0.36	-0.1
3,279,388	+		BT2628	0.36	-2.8
3,279,388	+		BT2628	0.36	-1.1
3,279,532	+		BT2628	0.39	-0.7
3,279,576	+		BT2628	0.41	-1.5
3,279,577	-		BT2628	0.41	-4.3
3,279,592	+		BT2628	0.41	-2.1
3,279,604	+		BT2628	0.41	-0.1
3,279,624	-		BT2628	0.42	-3.8
3,279,624	-		BT2628	0.42	-1.1
3,279,650	+		BT2628	0.42	-1.1
3,279,664	+		BT2628	0.43	-0.5
3,279,666	+		BT2628	0.43	-3.8
3,279,667	-		BT2628	0.43	-1.1
3,279,684	-		BT2628	0.43	-0.1
3,279,716	+		BT2628	0.44	-0.4
3,279,719	+		BT2628	0.44	-1.6
3,279,730	+		BT2628	0.44	-0.1
3,279,731	-		BT2628	0.44	-1.1
3,279,731	-		BT2628	0.44	-1.1
3,279,735	+		BT2628	0.44	-2.3
3,279,735	+		BT2628	0.44	-2.6
3,279,736	-		BT2628	0.45	-1.1
3,279,754	-		BT2628	0.45	-0.7
3,279,831	+		BT2628	0.47	-2.4
3,279,832	-		BT2628	0.47	-2.3
3,279,832	-		BT2628	0.47	-3.0
3,279,832	-		BT2628	0.47	-2.7
3,279,832	-		BT2628	0.47	-1.1
3,279,837	+		BT2628	0.47	-3.2
3,279,837	+		BT2628	0.47	-2.3
3,279,841	-		BT2628	0.47	-2.4
3,279,996	+		BT2628	0.51	-1.1
3,279,997	-		BT2628	0.51	-0.1
3,279,998	+		BT2628	0.51	-1.7
3,279,998	+		BT2628	0.51	-1.8
3,279,998	+		BT2628	0.51	+0.7
3,279,999	-		BT2628	0.51	-0.1
3,279,999	-		BT2628	0.51	-0.6
3,280,029	+		BT2628	0.52	-2.0
3,280,033	+		BT2628	0.52	-1.3
3,280,065	+		BT2628	0.53	-0.1
3,280,136	+		BT2628	0.54	-1.1
3,280,136	+		BT2628	0.54	-2.7
3,280,185	+		BT2628	0.56	-2.0
3,280,236	+		BT2628	0.57	-1.7
3,280,237	-		BT2628	0.57	-3.1
3,280,240	-		BT2628	0.57	-2.6
3,280,275	-		BT2628	0.58	-3.7
3,280,292	+		BT2628	0.58	-0.1
3,280,298	-		BT2628	0.58	-1.1
3,280,298	-		BT2628	0.58	-0.1
3,280,329	+		BT2628	0.59	+0.9
3,280,329	+		BT2628	0.59	-1.7
3,280,330	-		BT2628	0.59	+0.9
3,280,330	-		BT2628	0.59	-3.3
3,280,360	-		BT2628	0.60	-1.7
3,280,362	+		BT2628	0.60	-2.3
3,280,362	+		BT2628	0.60	-2.1
3,280,363	-		BT2628	0.60	-2.1
3,280,382	+		BT2628	0.61	+0.6
3,280,383	-		BT2628	0.61	-1.4
3,280,386	+		BT2628	0.61	-2.1
3,280,387	-		BT2628	0.61	-4.4
3,280,392	+		BT2628	0.61	-2.2
3,280,393	-		BT2628	0.61	-1.1
3,280,393	-		BT2628	0.61	-1.1
3,280,427	+		BT2628	0.62	-1.1
3,280,442	+		BT2628	0.62	-1.7
3,280,450	-		BT2628	0.62	-0.1
3,280,484	+		BT2628	0.63	-0.7
3,280,578	+		BT2628	0.65	-2.1
3,280,640	+		BT2628	0.67	-1.9
3,280,641	-		BT2628	0.67	-0.1
3,280,656	-		BT2628	0.67	-2.9
3,280,656	-		BT2628	0.67	-1.5
3,280,689	+		BT2628	0.68	-1.0
3,280,695	+		BT2628	0.68	+0.9
3,280,699	-		BT2628	0.68	-0.1
3,280,719	-		BT2628	0.69	-1.9
3,280,722	-		BT2628	0.69	-1.1
3,280,727	-		BT2628	0.69	-0.1
3,280,791	+		BT2628	0.71	-1.3
3,280,806	+		BT2628	0.71	-3.8
3,280,806	+		BT2628	0.71	-1.7
3,280,807	-		BT2628	0.71	-1.3
3,280,815	+		BT2628	0.71	-0.5
3,280,868	+		BT2628	0.73	-1.4
3,280,868	+		BT2628	0.73	-0.1
3,280,912	-		BT2628	0.74	-1.9
3,280,912	-		BT2628	0.74	-1.1
3,280,912	-		BT2628	0.74	-2.8
3,280,928	+				-0.7
3,280,964	+		BT2628	0.75	-0.1
3,280,965	-		BT2628	0.75	-2.0
3,280,994	+		BT2628	0.76	+0.9
3,280,995	-		BT2628	0.76	-2.4
3,280,995	-		BT2628	0.76	-1.7
3,281,080	+		BT2628	0.78	-2.1
3,281,152	-		BT2628	0.80	-1.1
3,281,152	-		BT2628	0.80	-1.7
3,281,184	+		BT2628	0.80	-2.8
3,281,184	+		BT2628	0.80	-1.1
3,281,224	+		BT2628	0.81	+0.5
3,281,272	-		BT2628	0.83	+0.9
3,281,302	+		BT2628	0.83	-2.1
3,281,302	+		BT2628	0.83	-1.4
3,281,303	-		BT2628	0.83	-1.7
3,281,306	+		BT2628	0.83	-0.8
3,281,306	+		BT2628	0.83	-1.7
3,281,306	+				-0.1
3,281,307	-		BT2628	0.83	-1.1
3,281,307	-		BT2628	0.83	-1.4
3,281,307	-		BT2628	0.83	+0.6
3,281,388	+		BT2628	0.85	-0.1
3,281,388	+		BT2628	0.85	-2.9
3,281,389	-		BT2628	0.85	-2.9
3,281,413	+		BT2628	0.86	-0.1
3,281,414	-		BT2628	0.86	-1.6
3,281,414	-		BT2628	0.86	-0.1
3,281,414	-		BT2628	0.86	-3.5
3,281,421	-		BT2628	0.86	-3.6
3,281,464	-		BT2628	0.87	-2.0
3,281,472	+		BT2628	0.87	-1.1
3,281,482	+		BT2628	0.88	-2.0
3,281,512	-		BT2628	0.88	-1.1
3,281,546	+		BT2628	0.89	-0.1
3,281,550	-		BT2628	0.89	-0.7
3,281,562	+		BT2628	0.90	-0.7
3,281,565	+		BT2628	0.90	-1.4
3,281,566	-		BT2628	0.90	-2.7
3,281,578	+				-1.4
3,281,596	-				-1.0
3,281,596	-				-0.6
3,281,602	-				-2.7
3,281,608	-				-3.1
3,281,608	-				-2.8
3,281,631	+				-1.1
3,281,633	+				-2.1
3,281,633	+				+0.9
3,281,633	+				-1.1
3,281,634	-				-3.6
3,281,634	-				-3.2
3,281,634	-				-1.1
3,281,646	+				-2.4
3,281,646	+				-3.7
3,281,715	-				-0.7
3,281,715	-				-2.8
3,281,743	+				-2.7
3,281,860	-				+0.9
3,281,869	-				-2.1
3,281,872	-				-0.8
3,281,877	+				-3.0
3,281,878	-				-1.8
3,281,879	+				-1.1
3,281,879	+				-0.1
3,281,880	-				+0.1
3,281,880	-				-2.4
3,281,916	-				-0.7
3,281,982	-				-2.6
3,282,074	+				-1.7
3,282,112	-				-1.1
3,282,276	-				+1.5
3,282,276	-				-1.7
3,282,280	+				-1.4
3,282,316	+				-0.1
3,282,337	+				+0.9
3,282,413	-				-1.1
3,282,413	-				-0.1
3,282,418	+		BT2629	0.10	-0.1
3,282,418	+		BT2629	0.10	-0.1
3,282,581	-		BT2629	0.17	-0.1
3,282,583	+		BT2629	0.17	-0.1
3,282,584	-		BT2629	0.17	-1.7
3,282,589	-		BT2629	0.18	-1.7
3,282,589	-		BT2629	0.18	-2.4
3,282,593	+		BT2629	0.18	-3.0
3,282,594	-		BT2629	0.18	-2.7
3,282,615	-		BT2629	0.19	-1.5
3,282,633	+		BT2629	0.20	-1.9
3,282,695	+		BT2629	0.22	-2.4
3,282,696	-		BT2629	0.22	-3.9
3,282,718	+		BT2629	0.23	-2.7
3,282,966	+		BT2629	0.34	-1.7
3,282,966	+		BT2629	0.34	-2.4