Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2365

Experiment: Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
2,949,765	+		BT2364	0.70	-2.8
2,949,766	-		BT2364	0.71	+0.9
2,949,793	-		BT2364	0.71	-1.1
2,949,831	+		BT2364	0.73	-2.1
2,949,868	+		BT2364	0.74	-1.3
2,949,869	-		BT2364	0.74	-0.8
2,949,911	+		BT2364	0.75	-1.7
2,950,190	-		BT2364	0.84	-1.4
2,950,219	-		BT2364	0.85	-1.1
2,950,241	+		BT2364	0.86	-1.4
2,950,291	-		BT2364	0.88	-1.1
2,950,291	-		BT2364	0.88	+0.9
2,950,291	-		BT2364	0.88	-0.1
2,950,318	-		BT2364	0.88	-0.6
2,950,345	-		BT2364	0.89	-1.9
2,950,345	-		BT2364	0.89	-0.7
2,950,399	+				-0.1
2,950,437	+				-1.1
2,950,531	+				-0.7
2,950,532	-				-0.4
2,950,540	-				-2.2
2,950,585	-				-0.1
2,950,664	-				-1.7
2,950,705	+				-1.8
2,950,705	+				+0.5
2,950,705	+				-0.2
2,950,705	+				-1.5
2,950,723	+				-0.1
2,950,723	+				+0.5
2,950,725	+				+1.5
2,950,726	-				-0.1
2,950,729	+				-1.7
2,950,730	-				-2.5
2,950,880	+		BT2365	0.12	-2.9
2,950,881	-		BT2365	0.12	-0.1
2,950,881	-		BT2365	0.12	-0.1
2,950,900	-		BT2365	0.13	-4.2
2,950,905	+		BT2365	0.13	-0.1
2,950,905	+		BT2365	0.13	-1.9
2,950,934	-		BT2365	0.15	-2.2
2,950,944	-		BT2365	0.16	-1.7
2,950,969	+		BT2365	0.18	-2.1
2,950,980	+		BT2365	0.18	-2.8
2,950,980	+		BT2365	0.18	-3.1
2,950,980	+		BT2365	0.18	-1.1
2,950,986	+		BT2365	0.19	-0.1
2,950,987	-		BT2365	0.19	-0.9
2,951,072	-		BT2365	0.24	-1.9
2,951,108	+		BT2365	0.27	-0.1
2,951,111	+		BT2365	0.27	-2.1
2,951,198	+		BT2365	0.33	-2.5
2,951,228	-		BT2365	0.35	-0.1
2,951,282	-		BT2365	0.38	-0.1
2,951,282	-		BT2365	0.38	-0.5
2,951,292	+		BT2365	0.39	-0.4
2,951,292	+		BT2365	0.39	-1.7
2,951,361	-		BT2365	0.44	-3.2
2,951,363	-		BT2365	0.44	+0.9
2,951,363	-		BT2365	0.44	-1.2
2,951,408	+		BT2365	0.47	-1.7
2,951,408	+		BT2365	0.47	-2.8
2,951,431	-		BT2365	0.48	-3.4
2,951,482	-		BT2365	0.52	-1.7
2,951,506	+		BT2365	0.53	-2.6
2,951,536	+		BT2365	0.55	+0.0
2,951,548	-		BT2365	0.56	-0.6
2,951,605	-		BT2365	0.60	-2.5
2,951,633	+		BT2365	0.62	-0.7
2,951,767	-		BT2365	0.71	-0.0
2,951,814	-		BT2365	0.74	-1.7
2,951,905	-		BT2365	0.80	-2.7
2,951,905	-		BT2365	0.80	-1.1
2,951,954	-		BT2365	0.83	-0.1
2,951,970	-		BT2365	0.85	-1.6
2,951,970	-		BT2365	0.85	-3.2
2,952,031	-		BT2365	0.89	-0.5
2,952,036	+		BT2365	0.89	-0.8
2,952,037	-		BT2365	0.89	-2.1
2,952,101	+				-0.8
2,952,101	+				-2.1
2,952,163	+				-0.1
2,952,179	+				-0.5
2,952,180	-				+1.5
2,952,181	+				-0.5
2,952,181	+				-1.7
2,952,181	+				-2.1
2,952,182	-				+0.9
2,952,198	+				-3.8
2,952,198	+				-1.7
2,952,218	-				-1.1
2,952,234	-				-1.7
2,952,234	-				-2.9
2,952,243	-				-1.5
2,952,283	-				-1.7
2,952,306	+				-1.7
2,952,306	+				-1.6
2,952,312	-				-1.8
2,952,373	+				-1.1
2,952,373	+				-0.1
2,952,401	-				-1.7
2,952,433	-				-1.1
2,952,451	-				+0.9
2,952,463	-				-1.1
2,952,475	-				+0.5
2,952,477	-				+0.9
2,952,480	+				-3.5
2,952,481	-				-0.7
2,952,542	+		BT2366	0.14	-0.1
2,952,542	+		BT2366	0.14	-0.1
2,952,542	+		BT2366	0.14	-4.2
2,952,543	-		BT2366	0.14	-1.1
2,952,610	-		BT2366	0.26	-1.1
2,952,712	+		BT2366	0.44	-2.2
2,952,716	-		BT2366	0.45	-1.2
2,952,716	-				-2.1
2,952,718	-		BT2366	0.45	-0.1
2,952,910	+		BT2366	0.79	-0.7
2,952,911	-		BT2366	0.79	-3.3
2,952,911	-		BT2366	0.79	-0.1
2,952,953	+		BT2366	0.87	-1.1
2,952,954	-		BT2366	0.87	-0.1
2,952,967	-		BT2366	0.89	-2.4
2,952,967	-		BT2366	0.89	-1.4
2,952,976	+				-0.1
2,952,993	-				+0.5
2,952,993	-				-1.1
2,953,018	+				-0.1
2,953,019	-				-2.2
2,953,019	-				-0.1
2,953,019	-				-1.9
2,953,025	-				-1.1
2,953,108	-				-1.1
2,953,181	+				-1.9
2,953,181	+				-2.4
2,953,185	+				-0.1
2,953,186	-				-3.4