Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2097

Experiment: Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
2,628,931	+		BT2096	0.15	+0.6
2,628,939	+		BT2096	0.16	-1.0
2,628,940	-		BT2096	0.16	-2.0
2,628,940	-		BT2096	0.16	-0.0
2,628,940	-		BT2096	0.16	-1.0
2,628,940	-		BT2096	0.16	-1.0
2,628,944	+		BT2096	0.17	+0.4
2,628,944	+		BT2096	0.17	-2.1
2,628,946	+		BT2096	0.17	-2.5
2,629,021	+		BT2096	0.24	-1.6
2,629,046	+				-1.0
2,629,047	-		BT2096	0.27	-1.9
2,629,163	+		BT2096	0.39	-1.7
2,629,168	+		BT2096	0.39	-0.6
2,629,200	+		BT2096	0.43	-1.6
2,629,219	+		BT2096	0.45	-1.6
2,629,292	+		BT2096	0.52	-1.6
2,629,352	-		BT2096	0.58	-0.0
2,629,352	-		BT2096	0.58	-2.3
2,629,356	+		BT2096	0.59	-2.3
2,629,360	+		BT2096	0.59	+1.6
2,629,360	+		BT2096	0.59	-2.1
2,629,360	+		BT2096	0.59	+1.0
2,629,360	+		BT2096	0.59	-0.0
2,629,418	-		BT2096	0.65	-1.8
2,629,425	+		BT2096	0.66	+1.0
2,629,438	+		BT2096	0.67	-2.7
2,629,462	+		BT2096	0.70	-1.6
2,629,519	+		BT2096	0.75	-0.3
2,629,519	+		BT2096	0.75	-2.8
2,629,547	+		BT2096	0.78	-1.0
2,629,641	+		BT2096	0.88	+0.2
2,629,719	+				-1.5
2,629,720	-				-2.6
2,629,736	-				-0.0
2,630,052	+				-1.0
2,630,107	+				-0.4
2,630,238	-		BT2097	0.15	-1.0
2,630,306	+		BT2097	0.18	-2.3
2,630,316	+		BT2097	0.19	+0.3
2,630,318	+		BT2097	0.19	-1.8
2,630,319	-		BT2097	0.19	-1.3
2,630,319	-		BT2097	0.19	-0.7
2,630,328	-		BT2097	0.19	-3.9
2,630,374	-		BT2097	0.22	-1.0
2,630,376	-		BT2097	0.22	-0.6
2,630,445	+		BT2097	0.25	-1.0
2,630,445	+		BT2097	0.25	-2.0
2,630,445	+		BT2097	0.25	-2.3
2,630,445	+		BT2097	0.25	-1.2
2,630,531	+		BT2097	0.29	-1.3
2,630,538	+		BT2097	0.30	-2.3
2,630,550	+		BT2097	0.30	-2.2
2,630,552	+		BT2097	0.30	-1.9
2,630,576	+		BT2097	0.31	-0.9
2,630,620	+		BT2097	0.34	-1.6
2,630,662	+		BT2097	0.36	-3.3
2,630,663	-		BT2097	0.36	+1.6
2,630,699	-		BT2097	0.37	-3.2
2,630,699	-		BT2097	0.37	-2.0
2,630,747	-		BT2097	0.40	-2.8
2,630,799	+		BT2097	0.42	-1.6
2,630,799	+		BT2097	0.42	-0.5
2,630,799	+		BT2097	0.42	-1.0
2,630,801	+		BT2097	0.42	-2.4
2,630,802	-		BT2097	0.42	-1.8
2,630,802	-		BT2097	0.42	-3.4
2,630,826	-		BT2097	0.44	-1.0
2,630,848	-		BT2097	0.45	-1.6
2,630,848	-		BT2097	0.45	-0.0
2,630,928	-		BT2097	0.49	-1.6
2,630,961	-		BT2097	0.50	-0.0
2,630,967	-		BT2097	0.50	-1.0
2,630,996	+		BT2097	0.52	-2.6
2,630,996	+		BT2097	0.52	-1.4
2,631,011	+		BT2097	0.53	-1.6
2,631,012	-		BT2097	0.53	-1.4
2,631,165	+		BT2097	0.60	-0.8
2,631,167	+		BT2097	0.60	-1.4
2,631,168	-		BT2097	0.60	-0.0
2,631,193	-		BT2097	0.61	-0.0
2,631,193	-		BT2097	0.61	-1.0
2,631,235	-		BT2097	0.63	-0.0
2,631,269	+		BT2097	0.65	-3.2
2,631,374	+		BT2097	0.70	-1.6
2,631,374	+		BT2097	0.70	-2.5
2,631,436	+		BT2097	0.73	-1.5
2,631,454	-		BT2097	0.74	-1.0
2,631,520	+		BT2097	0.77	-1.8
2,631,679	+		BT2097	0.85	-0.0
2,631,680	-		BT2097	0.85	-0.0
2,631,698	+		BT2097	0.86	-3.0
2,631,699	-		BT2097	0.86	-0.0
2,631,699	-		BT2097	0.86	-2.0
2,631,699	-		BT2097	0.86	-1.4
2,631,725	+		BT2097	0.87	-3.3
2,631,759	-		BT2097	0.89	-2.1
2,631,780	+		BT2097	0.90	-0.0
2,631,781	-		BT2097	0.90	-1.0
2,631,797	-				-0.0
2,631,826	+				+0.4
2,631,897	-				-0.0
2,631,914	+				-0.8
2,631,914	+				-2.8
2,631,914	+				-2.7
2,631,927	+				-1.0
2,631,942	-				-0.6
2,631,971	-				+0.3
2,631,976	+				-0.9
2,631,987	+				-0.3
2,631,992	+				-2.3
2,632,008	-				-0.6
2,632,046	-				-1.8
2,632,060	-				-0.6
2,632,086	+				-0.5
2,632,096	-				-0.0
2,632,181	+				-0.6
2,632,209	-				-1.0
2,632,216	+				-0.0
2,632,217	-				-1.6
2,632,219	+				-2.6
2,632,220	-				+0.6
2,632,289	-				-2.3
2,632,290	+				-2.2
2,632,290	+				-2.6
2,632,290	+				-2.6
2,632,290	+				-1.3
2,632,291	-				+0.6
2,632,355	-		BT2098	0.15	-0.8
2,632,361	-		BT2098	0.16	-1.0
2,632,390	+		BT2098	0.18	-0.0
2,632,390	+		BT2098	0.18	-1.3
2,632,391	-		BT2098	0.18	-0.0
2,632,391	-		BT2098	0.18	+0.1
2,632,401	+		BT2098	0.19	+1.0
2,632,480	+		BT2098	0.26	-1.0
2,632,480	+		BT2098	0.26	-1.0
2,632,480	+		BT2098	0.26	-1.2
2,632,481	-		BT2098	0.26	-1.8
2,632,481	-		BT2098	0.26	-0.0
2,632,481	-		BT2098	0.26	-0.0
2,632,484	+		BT2098	0.26	-3.6
2,632,485	-		BT2098	0.27	-1.0
2,632,575	+		BT2098	0.34	-0.8
2,632,598	+		BT2098	0.36	-0.2
2,632,599	-		BT2098	0.37	-1.3
2,632,636	+		BT2098	0.40	-1.5
2,632,666	+		BT2098	0.42	-1.6
2,632,667	-		BT2098	0.43	-1.0
2,632,667	-		BT2098	0.43	-0.5
2,632,668	+		BT2098	0.43	+1.0
2,632,728	+		BT2098	0.48	+1.0
2,632,730	+		BT2098	0.48	-2.8
2,632,731	-		BT2098	0.48	-0.4
2,632,731	-		BT2098	0.48	-0.0
2,632,734	+		BT2098	0.48	-0.1
2,632,734	+		BT2098	0.48	-2.3
2,632,734	+		BT2098	0.48	-2.0
2,632,735	-		BT2098	0.49	-1.0
2,632,739	-		BT2098	0.49	-1.5
2,632,739	-		BT2098	0.49	-1.0
2,632,746	+		BT2098	0.49	-1.0
2,632,874	+		BT2098	0.61	-3.9
2,632,956	+		BT2098	0.68	-3.0
2,632,956	+		BT2098	0.68	-0.5
2,632,956	+		BT2098	0.68	-3.3
2,632,957	-		BT2098	0.68	-1.6