Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1542

Experiment: Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
1,900,141	+		BT1540	0.76	-1.1
1,900,216	+		BT1540	0.85	-2.1
1,900,308	+				-1.1
1,900,343	+				-2.9
1,900,496	+		BT1541	0.11	-1.1
1,900,513	+		BT1541	0.14	-1.9
1,900,704	+		BT1541	0.47	-0.6
1,900,723	+		BT1541	0.50	-0.1
1,900,793	-		BT1541	0.62	-3.1
1,900,827	-		BT1541	0.68	+0.5
1,900,827	-		BT1541	0.68	-2.4
1,901,062	+				-0.1
1,901,063	-				-1.9
1,901,063	-				-0.9
1,901,084	-				-2.9
1,901,125	+				-1.6
1,901,125	+				+1.5
1,901,125	+				-2.0
1,901,136	+				-0.1
1,901,139	+				-2.5
1,901,252	+				-0.1
1,901,260	-		BT1542	0.10	-0.1
1,901,308	+		BT1542	0.14	-0.9
1,901,326	-		BT1542	0.15	-2.6
1,901,334	+		BT1542	0.16	-1.9
1,901,335	-		BT1542	0.16	-5.0
1,901,341	+		BT1542	0.16	-0.1
1,901,342	-		BT1542	0.16	+0.9
1,901,342	-		BT1542	0.16	-1.1
1,901,434	+		BT1542	0.23	-1.1
1,901,435	-		BT1542	0.23	-1.6
1,901,443	-		BT1542	0.24	-1.1
1,901,556	+		BT1542	0.32	+0.5
1,901,556	+		BT1542	0.32	-0.1
1,901,558	+		BT1542	0.32	-0.5
1,901,558	+		BT1542	0.32	-3.5
1,901,559	-		BT1542	0.32	-4.4
1,901,588	-		BT1542	0.34	-0.1
1,901,595	+		BT1542	0.35	-1.1
1,901,638	-		BT1542	0.38	-1.1
1,901,681	-		BT1542	0.41	-5.1
1,901,884	+		BT1542	0.56	-0.1
1,901,884	+		BT1542	0.56	-4.7
1,902,009	-		BT1542	0.65	-0.1
1,902,012	+		BT1542	0.65	-1.6
1,902,027	+		BT1542	0.66	-2.9
1,902,028	-		BT1542	0.66	-1.1
1,902,028	-		BT1542	0.66	-6.4
1,902,029	+		BT1542	0.66	-3.5
1,902,030	-		BT1542	0.67	-3.3
1,902,070	+		BT1542	0.69	-4.4
1,902,164	+		BT1542	0.76	-6.1
1,902,330	+		BT1542	0.88	-1.4
1,902,330	+		BT1542	0.88	-2.4
1,902,345	+		BT1542	0.89	+0.9
1,902,345	+		BT1542	0.89	-2.4
1,902,345	+		BT1542	0.89	-0.1
1,902,346	-		BT1542	0.90	-2.1
1,902,381	+				+1.9
1,902,382	-				-0.5
1,902,418	-				-4.1
1,902,418	-				-4.5
1,902,486	-				-0.1
1,902,611	+				-2.1
1,902,612	-				-3.1
1,902,617	+				-0.1
1,902,667	-				-0.9
1,902,688	-				-1.1
1,902,694	-				-2.1
1,902,694	-				-3.1
1,902,698	-				-1.6
1,902,698	-				-0.6
1,902,831	-				-0.6
1,902,845	+				-0.1
1,902,867	+				-2.8
1,902,867	+				-0.9
1,902,867	+				-1.1
1,902,868	-				-1.1
1,902,871	+				+1.8
1,902,872	-				-1.1
1,902,898	-				-2.5
1,902,912	-				-0.1
1,902,915	-				-0.8
1,902,984	-				+0.9
1,903,064	-				-2.4
1,903,064	-				-0.6
1,903,083	-				-0.8
1,903,104	+				-1.6
1,903,183	+				-1.7
1,903,256	+		BT1543	0.13	-1.1
1,903,280	+		BT1543	0.14	-1.8
1,903,314	+		BT1543	0.16	-2.4
1,903,321	+		BT1543	0.17	-1.6
1,903,343	-		BT1543	0.18	-1.9
1,903,343	-		BT1543	0.18	-0.6
1,903,460	+		BT1543	0.25	-1.1