Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1309

Experiment: Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
1,632,727	+		BT1308	0.27	-0.0
1,632,782	+		BT1308	0.32	-0.0
1,632,922	+		BT1308	0.43	-0.0
1,633,049	-		BT1308	0.54	-2.6
1,633,094	+		BT1308	0.58	-1.0
1,633,094	+		BT1308	0.58	-0.0
1,633,221	+		BT1308	0.68	-2.3
1,633,423	+		BT1308	0.85	-0.6
1,633,424	-		BT1308	0.85	-2.0
1,633,488	+				-1.3
1,633,502	-				-2.6
1,633,517	-				-1.6
1,633,523	-				-0.7
1,633,586	-				-2.0
1,633,600	+				-1.6
1,633,600	+				+1.6
1,633,601	-				-1.6
1,633,661	-				-0.8
1,633,661	-				-0.0
1,633,712	-				-2.6
1,633,760	-		BT1309	0.19	-2.8
1,633,812	+		BT1309	0.32	-1.0
1,633,820	-		BT1309	0.34	+1.0
1,633,826	-		BT1309	0.36	-2.3
1,633,826	-		BT1309	0.36	-1.6
1,633,826	-		BT1309	0.36	-2.0
1,633,828	+		BT1309	0.36	-3.0
1,633,857	+		BT1309	0.44	-0.8
1,633,879	-		BT1309	0.49	-1.6
1,633,967	-		BT1309	0.71	-1.0
1,634,076	+				-1.8
1,634,135	+				-1.0
1,634,162	-				-0.0
1,634,178	+				-0.3
1,634,275	+		BT1310	0.18	-0.6
1,634,276	-		BT1310	0.18	-1.6
1,634,287	-		BT1310	0.19	-0.4
1,634,287	-		BT1310	0.19	-1.3
1,634,311	+		BT1310	0.23	-0.1
1,634,311	+		BT1310	0.23	-0.0
1,634,328	-		BT1310	0.26	-0.5
1,634,328	-		BT1310	0.26	-0.0
1,634,330	-		BT1310	0.26	-2.3
1,634,330	-		BT1310	0.26	-1.4
1,634,349	-		BT1310	0.29	-0.4
1,634,402	+		BT1310	0.37	-2.0
1,634,405	-		BT1310	0.37	-1.0
1,634,424	-		BT1310	0.40	-1.3
1,634,425	+		BT1310	0.40	-1.0
1,634,447	-		BT1310	0.44	-3.6
1,634,462	+		BT1310	0.46	-2.0
1,634,463	-		BT1310	0.46	-0.6
1,634,466	-		BT1310	0.47	-1.6
1,634,467	+		BT1310	0.47	-0.0
1,634,612	+		BT1310	0.69	-1.8
1,634,636	-		BT1310	0.72	-2.6
1,634,636	-		BT1310	0.72	-2.3
1,634,826	+				-1.0
1,634,830	-				-1.0
1,634,836	+				-1.0
1,634,864	-				-0.3
1,634,904	-				-2.0