Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0010

Experiment: Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mannan from Saccharomyces cerevisiae; autoclaved 2.5 mg/ml (C)
5,868	+		BT0009	0.21	-3.4
5,925	-		BT0009	0.26	-3.9
5,925	-		BT0009	0.26	-2.9
5,989	-		BT0009	0.32	-1.7
6,001	-		BT0009	0.33	-1.2
6,086	-		BT0009	0.41	+0.9
6,086	-		BT0009	0.41	-1.1
6,086	-		BT0009	0.41	+0.9
6,218	-		BT0009	0.53	-3.4
6,516	+		BT0009	0.80	-0.4
6,540	-		BT0009	0.82	+0.1
6,545	-		BT0009	0.82	-0.8
6,546	+		BT0009	0.82	+0.9
6,716	-				-1.1
6,716	-				-1.7
6,744	+				+0.9
6,750	+				+0.2
6,751	-				-1.7
6,758	+				-0.8
6,759	-				-0.9
6,834	+				-0.1
6,858	-				-1.1
6,858	-				-2.4
6,925	-		BT0010	0.12	-1.1
7,277	+		BT0010	0.45	-2.0
7,277	+		BT0010	0.45	-1.1
7,348	-		BT0010	0.51	-0.7
7,348	-		BT0010	0.51	-1.9
7,353	-		BT0010	0.52	-0.7
7,614	-		BT0010	0.76	-1.1
7,627	-		BT0010	0.77	-1.1
7,756	+		BT0010	0.89	-0.1
7,908	+				-1.1
7,909	-				+0.5
7,937	-				-0.1
7,967	-				-0.4
7,996	+				-0.1
7,997	-				-1.1
8,059	-				+0.9
8,097	-				-0.4
8,138	-				-4.3
8,138	-				-0.1
8,154	-				-3.3
8,393	+		BT0011	0.37	-0.9
8,393	+		BT0011	0.37	-0.1
8,394	-		BT0011	0.38	+1.5
8,448	-		BT0011	0.44	-0.1
8,448	-		BT0011	0.44	-1.2
8,472	-		BT0011	0.47	-0.4
8,497	-		BT0011	0.50	+0.3
8,505	-		BT0011	0.51	+0.6
8,505	-		BT0011	0.51	-0.4
8,550	-		BT0011	0.56	+0.5
8,550	-		BT0011	0.56	-1.1
8,550	-		BT0011	0.56	-1.1
8,551	+		BT0011	0.56	-1.1
8,681	+		BT0011	0.71	+0.2
8,688	-		BT0011	0.72	-0.1
8,711	-		BT0011	0.75	-1.3
8,767	+		BT0011	0.82	-0.1